RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 WRNIP1Q96S55 665 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TMEM47Q9BQJ4 181 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 AGXT2Q9BYV1 514 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GLIS2Q9BZE0 524 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 AS3MTQ9HBK9 375 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 NCOA5Q9HCD5 579 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 IL17RBQ9NRM6 502 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 RBM28Q9NW13 759 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 MTMR4Q9NYA4 1195 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 POTECB2RU33 542 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 LARGE1O95461 756 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 EEF2P13639 858 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SSRP1Q08945 709 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CDAN1Q8IWY9 1227 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 LRRC47Q8N1G4 583 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CCDC82Q8N4S0 544 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GTF3C6Q969F1 213 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 DDX11Q96FC9 970 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 INTS4Q96HW7 963 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 DNAJC18Q9H819 358 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SENP2Q9HC62 589 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GINM1Q9NU53 330 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 NYAP2Q9P242 653 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ZBTB21Q9ULJ3 1066 aa12.41□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SIPA1L1O43166 1804 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 USP17L5A8MUK1 530 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 H3BQV1 296 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GJB2P29033 226 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 MAP3K9P80192 1104 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 HMGN5P82970 282 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SCRN1Q12765 414 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CUL4AQ13619 759 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TRIM29Q14134 588 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 IFFO2Q5TF58 517 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 WASF1Q92558 559 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ANKS1AQ92625 1134 aa12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 LLPHQ9BRT6 129 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-211ENST00000538363 PDCP20941 246 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SLC1A4P43007 532 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 RCAN1P53805 252 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 EVCP57679 992 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ZYXQ15942 572 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SLFN13Q68D06 897 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 C2orf69Q8N8R5 385 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SLC26A6Q9BXS9 759 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PGAP2Q9UHJ9 254 aa12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-211ENST00000538363 XBP1P17861 261 aa12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 INPP5BP32019 993 aa12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 FOSBP53539 338 aa12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 LARP1BQ659C4 914 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PIBF1Q8WXW3 757 aa12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ZKSCAN4Q969J2 545 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 VAT1LQ9HCJ6 419 aa12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CHMP5Q9NZZ3 219 aa12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PLIN4Q96Q06 1357 aa12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 OTOFQ9HC10 1997 aa12.38□□□□□ -0.43
TNFRSF1A-211ENST00000538363 FRMPD2Q68DX3 1309 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 IGKV6D-41A0A0C4DH26 115 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PPFIA3O75145 1194 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 USP2O75604 605 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GOLGA8HP0CJ92 632 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 NUCB2P80303 420 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 MAP3K10Q02779 954 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GNL2Q13823 731 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GRM4Q14833 912 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ASPRV1Q53RT3 343 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 RCSD1Q6JBY9 416 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 DLK2Q6UY11 383 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ANKRD13AQ8IZ07 590 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 DCAF4Q8WV16 495 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 MAP3K14Q99558 947 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 TMOD4Q9NZQ9 345 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SEC63Q9UGP8 760 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 FZD1Q9UP38 647 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
TNFRSF1A-211ENST00000538363 VPS37CA5D8V6 355 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 USP17L10C9JJH3 530 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 KLRF2D3W0D1 207 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 F5H6K3 240 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 TRAF5O00463 557 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PDIA4P13667 645 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 USP14P54578 494 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 KLRC3Q07444 240 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms