RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 NCOA7Q8NI08 942 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 TMC2Q8TDI7 906 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 UPF2Q9HAU5 1272 aaKnown RBP13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 KCNH4Q9UQ05 1017 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 ZHX2Q9Y6X8 837 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 TSPY2A6NKD2 308 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 FAM196BA6NMK8 535 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 MPHOSPH10O00566 681 aaKnown RBP13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 ARHGAP33O14559 1287 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 SLC27A2O14975 620 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 GH2P01242 217 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 CETPP11597 493 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 PSMA5P28066 241 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 USP14P54578 494 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 HAND2P61296 217 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 TFAP4Q01664 338 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 SREBF2Q12772 1141 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 RALYLQ86SE5 291 aaKnown RBP13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 MKL1Q969V6 931 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 OPTNQ96CV9 577 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 CLMNQ96JQ2 1002 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 ELP3Q9H9T3 547 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 ARHGEF10LQ9HCE6 1279 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 ZCCHC17Q9NP64 241 aaKnown RBP13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 AFG3L2Q9Y4W6 797 aa13.03□□□□□ -0.32
AC087235.1-201ENST00000538297 LAMA4Q16363 1823 aa13.02□□□□□ -0.32
AC087235.1-201ENST00000538297 MYH8P13535 1937 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 USP17L10C9JJH3 530 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 E7EWF7 191 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 BACE1P56817 501 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 SART3Q15020 963 aaKnown RBP13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 RAB3GAP1Q15042 981 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 C8orf34Q49A92 452 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 SH3D19Q5HYK7 790 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 OTUD7BQ6GQQ9 843 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 RASAL3Q86YV0 1011 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 SLC44A5Q8NCS7 719 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 CAPNS2Q96L46 248 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 NBPF3Q9H094 633 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 KIAA1683Q9H0B3 1180 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 TOMM22Q9NS69 142 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 MTMR4Q9NYA4 1195 aa13.02□□□□□ -0.33
AC087235.1-201ENST00000538297 DOCK1Q14185 1865 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 TTLL1O95922 423 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 TM4SF4P48230 202 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 NOVP48745 357 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 RRP1BQ14684 758 aaKnown RBP13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 DGKHQ86XP1 1220 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 TBC1D10CQ8IV04 446 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 PROCA1Q8NCQ7 364 aaPredicted RBP13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 ANKS1AQ92625 1134 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 LPAR1Q92633 364 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 ZSWIM5Q9P217 1185 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 FZD1Q9UP38 647 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 SLC45A1Q9Y2W3 748 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 TMX2Q9Y320 296 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 WDR33Q9C0J8 1336 aaKnown RBP13.01□□□□□ -0.33
AC087235.1-201ENST00000538297 IGKV6D-41A0A0C4DH26 115 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 IRF6O14896 467 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 PRDM1O75626 825 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 GDF11O95390 407 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 AKR1B1P15121 316 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 MCM5P33992 734 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 ICA1Q05084 483 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 SPP2Q13103 211 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 PABPC4Q13310 644 aaKnown RBP eCLIP13□□□□□ -0.33
AC087235.1-201ENST00000538297 SEPT2Q15019 361 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 IL17RAQ96F46 866 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 TM6SF1Q9BZW5 370 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 OTOFQ9HC10 1997 aa13□□□□□ -0.33
AC087235.1-201ENST00000538297 A0A0G2JLL6 359 aaPredicted RBP12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 ERICH2A1L162 156 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 KDM4AO75164 1064 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 GUCY1A2P33402 732 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 MAP2K1Q02750 393 aaPredicted RBP12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 USP17L2Q6R6M4 530 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 PRRT2Q7Z6L0 340 aaPredicted RBP12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 FBXL16Q8N461 479 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 DNAJC5GQ8N7S2 189 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 C12orf42Q96LP6 360 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 NEK1Q96PY6 1258 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 GOPCQ9HD26 462 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 TMOD4Q9NZQ9 345 aa12.99□□□□□ -0.33
AC087235.1-201ENST00000538297 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms