RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 CTNND1O60716 968 aaKnown RBP12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 HMGCS2P54868 508 aa12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 ERVK-9P63128 1117 aa12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 ERVK-24P63145 666 aa12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 SPP2Q13103 211 aa12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 PKN1Q16512 942 aa12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 PTCRAQ6ISU1 281 aaPredicted RBP12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 TMEM199Q8N511 208 aa12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 RBPJLQ9UBG7 517 aa12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
PRKAB1-204ENST00000538271 FAM208BQ5VWN6 2430 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 APBB1O00213 710 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 SEPT4O43236 478 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 IGHA2P01877 340 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 NEFMP07197 916 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 MLLT3P42568 568 aaPredicted RBP12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 IRX3P78415 501 aaPredicted RBP12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 DGLUCYQ7Z3D6 616 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
PRKAB1-204ENST00000538271 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 FGBP02675 491 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 HOXC6P09630 235 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 KCNA5P22460 613 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 HIBADHP31937 336 aaKnown RBP12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 GYG1P46976 350 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 HERVK_113P62684 666 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 FAM47AQ5JRC9 791 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 ZFPM1Q8IX07 1006 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 NPLOC4Q8TAT6 608 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 CWC22Q9HCG8 908 aaKnown RBP12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 IL23AQ9NPF7 189 aa12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 SETXQ7Z333 2677 aaKnown RBP12.16□□□□□ -0.46
PRKAB1-204ENST00000538271 A0A1W2PQ45 241 aaPredicted RBP12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 A0A1W2PQY0 241 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 CA3P07451 260 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 SLURP2P0DP57 97 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 MAP3K10Q02779 954 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 GRB10Q13322 594 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 OTOP2Q7RTS6 562 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 SUGP1Q8IWZ8 645 aaKnown RBP12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 ZNF280CQ8ND82 737 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 TBC1D22AQ8WUA7 517 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 ARNTL2Q8WYA1 636 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 PBXIP1Q96AQ6 731 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 FAM84BQ96KN1 310 aaPredicted RBP12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 PHAXQ9H814 394 aaKnown RBP12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 RALYQ9UKM9 306 aaKnown RBP12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 NDUFB9Q9Y6M9 179 aa12.15□□□□□ -0.46
PRKAB1-204ENST00000538271 ZNF536O15090 1300 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 SLC15A5A6NIM6 579 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 LPXNO60711 386 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 GLRX3O76003 335 aaKnown RBP12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 ZP2Q05996 745 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 ST3GAL2Q16842 350 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 CDC42EP5Q6NZY7 148 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 OXER1Q8TDS5 423 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 UPF3BQ9BZI7 483 aaKnown RBP12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 DMXL1Q9Y485 3027 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 USP24Q9UPU5 2620 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 VPS13AQ96RL7 3174 aa12.14□□□□□ -0.47
PRKAB1-204ENST00000538271 MAST3O60307 1309 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 PLIN1O60240 522 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 CSF1RP07333 972 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 PTPREP23469 700 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 HERC4Q5GLZ8 1057 aaPredicted RBP12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 TMEM67Q5HYA8 995 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 RMDN1Q96DB5 314 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 PAGR1Q9BTK6 254 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 FSD1Q9BTV5 496 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 MUTYHQ9UIF7 546 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 COL4A4P53420 1690 aaPredicted RBP12.13□□□□□ -0.47
PRKAB1-204ENST00000538271 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 H0Y858 1186 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 M0R296 226 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 IGKV5-2P06315 115 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 HOXB7P09629 217 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 IRS1P35568 1242 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 EDAQ92838 391 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 PLA2G12BQ9BX93 195 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 PPP1R12CQ9BZL4 782 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 TLR9Q9NR96 1032 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 PRKAG3Q9UGI9 489 aa12.12□□□□□ -0.47
PRKAB1-204ENST00000538271 SPTBN2O15020 2390 aa12.11□□□□□ -0.47
PRKAB1-204ENST00000538271 ATP2A2P16615 1042 aaKnown RBP12.11□□□□□ -0.47
PRKAB1-204ENST00000538271 GRB14Q14449 540 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms