RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CCDC114Q96M63 670 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 PRKAG2Q9UGJ0 569 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 MED23Q9ULK4 1368 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 IQGAP3Q86VI3 1631 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 CYP27B1O15528 508 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 TACC1O75410 805 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 TNFAIP3P21580 790 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 LMBR1Q8WVP7 490 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 ARHGEF1Q92888 912 aaKnown RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 APOL6Q9BWW8 343 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 GTPBP4Q9BZE4 634 aaKnown RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 AP5M1Q9H0R1 490 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 DDX25Q9UHL0 483 aaKnown RBP5.99□□□□□ -1.45
LRP6-203ENST00000538239 RASAL2Q9UJF2 1139 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 KIF24Q5T7B8 1368 aa5.99□□□□□ -1.45
LRP6-203ENST00000538239 EXOC3O60645 756 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 ABL1P00519 1130 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 FGAP02671 866 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 SNAP25P60880 206 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 KARSQ15046 597 aaKnown RBP5.98□□□□□ -1.45
LRP6-203ENST00000538239 EEPD1Q7L9B9 569 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 PLA2G4DQ86XP0 818 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 C2orf69Q8N8R5 385 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 ATP6V0A2Q9Y487 856 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 OVOS2A0A0G2JMS6 1433 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 OVOS2A0A0J9YW53 1432 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 OVOS2Q6IE36 1432 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 PLA2R1Q13018 1463 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 ECE2O60344 883 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
LRP6-203ENST00000538239 DIXDC1Q155Q3 683 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 TXNRD1Q16881 649 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 INF2Q27J81 1249 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 SYNE4Q8N205 404 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 TEKT3Q9BXF9 490 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 A0A1W2PRG0 241 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 TNNI1P19237 187 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 CACNB3P54284 484 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 PI16Q6UXB8 463 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 BLIDQ8IZY5 108 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 INTS4Q96HW7 963 aaKnown RBP5.98□□□□□ -1.45
LRP6-203ENST00000538239 INCENPQ9NQS7 918 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 GUCA1BQ9UMX6 200 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 CUTAO60888 179 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 LRMPQ12912 555 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 PPP2R5BQ15173 497 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 KMT5BQ4FZB7 885 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 CDC37L1Q7L3B6 337 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 PAIP2Q9BPZ3 127 aaKnown RBP5.98□□□□□ -1.45
LRP6-203ENST00000538239 PRKAB2O43741 272 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 STAMBPO95630 424 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 TTLL1O95922 423 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 GPBP1Q86WP2 473 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 CSGALNACT2Q8N6G5 542 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 ANTXR1Q9H6X2 564 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 CAMSAP1Q5T5Y3 1602 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 QRICH2Q9H0J4 1663 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 NR1I2O75469 434 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 FMNL1O95466 1100 aaPredicted RBP5.98□□□□□ -1.45
LRP6-203ENST00000538239 USP17L8P0C7I0 530 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 MECOMQ03112 1051 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 KIF5AQ12840 1032 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 RASA3Q14644 834 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 ASIC2Q16515 512 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 GRIPAP1Q4V328 841 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 SLC27A3Q5K4L6 730 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 DYNLL2Q96FJ2 89 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 SYNRGQ9UMZ2 1314 aa5.98□□□□□ -1.45
LRP6-203ENST00000538239 CETN3O15182 167 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 SKILP12757 684 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 POLGP54098 1239 aaPredicted RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 KRT83P78385 493 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 FAM160B1Q5W0V3 765 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CCDC186Q7Z3E2 898 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 ZBTB8OSQ8IWT0 167 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 LCORLQ8N3X6 602 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 SEPT9Q9UHD8 586 aaPredicted RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 DBNLQ9UJU6 430 aaKnown RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 ZHX1Q9UKY1 873 aaPredicted RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 RIMS1Q86UR5 1692 aaKnown RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 ZMYM6O95789 1325 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 SASH1O94885 1247 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 FERP16591 822 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 LIG4P49917 911 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CYP2J2P51589 502 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 FAM160A1Q05DH4 1040 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 COA1Q9GZY4 146 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 LZTFL1Q9NQ48 299 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 NARFQ9UHQ1 456 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 AKT3Q9Y243 479 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CDK12Q9NYV4 1490 aaPredicted RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 ZEB2O60315 1214 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CD19P15391 556 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CKAP4Q07065 602 aaKnown RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 PAK1Q13153 545 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 ATL3Q6DD88 541 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CTR9Q6PD62 1173 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CCDC63Q8NA47 563 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 FANCBQ8NB91 859 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 PGBD1Q96JS3 809 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms