RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 MAN1B1Q9UKM7 699 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 WNT7AO00755 349 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 DYNC1I1O14576 645 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 PLCG2P16885 1265 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 RASA1P20936 1047 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 FANCCQ00597 558 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 TTC38Q5R3I4 469 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 FILIP1Q7Z7B0 1213 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 TRIML1Q8N9V2 468 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 SPATA20Q8TB22 786 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 FAM205AQ6ZU69 1335 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 BAZ2BQ9UIF8 2168 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 TRIM37O94972 964 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 SMC2O95347 1197 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 TSPY3P0CV98 308 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 TSPY8P0CW00 308 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 CALML3P27482 149 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 LMOD1P29536 600 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 ATP2C1P98194 919 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 MORC3Q14149 939 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 PROM2Q8N271 834 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 MLKLQ8NB16 471 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 ZNF287Q9HBT7 754 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 GAKO14976 1311 aa13.05□□□□□ -0.32
SLC28A1-204ENST00000538177 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 RHBDL3P58872 404 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 CCZ1BP86790 482 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 CCZ1P86791 482 aaPredicted RBP13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 ZNF174Q15697 407 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 C16orf86Q6ZW13 317 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 SMARCE1Q969G3 411 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 MAD2L2Q9UI95 211 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 SKILP12757 684 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 GTF2F1P35269 517 aaKnown RBP eCLIP13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 SH3RF1Q7Z6J0 888 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 STAG2Q8N3U4 1231 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 PDILTQ8N807 584 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 EPSTI1Q96J88 318 aa13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 SAP30BPQ9UHR5 308 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-204ENST00000538177 NAV1Q8NEY1 1877 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 A0A087X0B3 334 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 ATP1A3P13637 1013 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 CDK8P49336 464 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 PTGDRQ13258 359 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 BLIDQ8IZY5 108 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 FAM177A1Q8N128 213 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 TMEM47Q9BQJ4 181 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 KCND1Q9NSA2 647 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 PALM3A6NDB9 673 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 ADAMTS3O15072 1205 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 CBFA2T2O43439 604 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 SLC35G1Q2M3R5 365 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 TMC6Q7Z403 805 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 GRAMD1CQ8IYS0 662 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 CCDC150Q8NCX0 1101 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 NEDD1Q8NHV4 660 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 DACH1Q9UI36 760 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
SLC28A1-204ENST00000538177 FLT1P17948 1338 aa13.02□□□□□ -0.32
SLC28A1-204ENST00000538177 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 CT47A1Q5JQC4 288 aaPredicted RBP13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 ENOX1Q8TC92 643 aaKnown RBP13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 DHX58Q96C10 678 aa13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 FANCLQ9NW38 375 aa13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 LTBP1Q14766 1721 aa13.02□□□□□ -0.33
SLC28A1-204ENST00000538177 M0R2N6 131 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 CYTH3O43739 400 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 UBASH3AP57075 661 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 GALNT17Q6IS24 598 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 DAGLBQ8NCG7 672 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 PAGE5Q96GU1 130 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 EYA3Q99504 573 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 COA1Q9GZY4 146 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 SNED1Q8TER0 1413 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 CDK5RAP2Q96SN8 1893 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms