RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PAK1Q13153 545 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 POSTNQ15063 836 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 GDAP1Q8TB36 358 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 CCHCR1Q8TD31 782 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 ZCCHC17Q9NP64 241 aaKnown RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 SLC4A4Q9Y6R1 1079 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 PIK3R4Q99570 1358 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 PNOCQ13519 176 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CASC4Q6P4E1 433 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 TEKT1Q969V4 418 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 KAT14Q9H8E8 782 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 NUTM2BA6NNL0 878 aaPredicted RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 NUTM2EB1AL46 878 aaPredicted RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 KRT5P13647 590 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 IGHMBP2P38935 993 aaKnown RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 LRRC8CQ8TDW0 803 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 ZBTB10Q96DT7 871 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 NCOA5Q9HCD5 579 aaKnown RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 MBIPQ9NS73 344 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 TSPY2A6NKD2 308 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 KDM1AO60341 852 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 TSPY3P0CV98 308 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 TSPY8P0CW00 308 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 TMED10P49755 219 aaKnown RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 TSPY1Q01534 308 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 PKP1Q13835 747 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 P3H4Q92791 437 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 NRBF2Q96F24 287 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF3Q9H094 633 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 ADGBQ8N7X0 1667 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 SBNO2Q9Y2G9 1366 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CFAP43Q8NDM7 1665 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 KCNJ18B7U540 433 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 RPS6KB1P23443 525 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 PPP2R5CQ13362 524 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 KCNJ12Q14500 433 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 C6orf118Q5T5N4 469 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 KRT23Q9C075 422 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 MAP3K2Q9Y2U5 619 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 MAP2P11137 1827 aaKnown RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CTAGE3PQ8IX95 158 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 SYCE1Q8N0S2 351 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 KLC4Q9NSK0 619 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 DAPK1P53355 1430 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 SERPINI2O75830 405 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CASP8Q14790 479 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 NAA30Q147X3 362 aaPredicted RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC89Q8N998 374 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC68Q9H2F9 335 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 AATFQ9NY61 560 aaKnown RBP eCLIP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 KRT14P02533 472 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC159P0C7I6 412 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 IL9RQ01113 521 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CHCHD3Q9NX63 227 aaKnown RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CTTNBP2Q8WZ74 1663 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CWF19L2Q2TBE0 894 aaKnown RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 RMDN2Q96LZ7 410 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 NEK2P51955 445 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 MORC3Q14149 939 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 PPP2R5DQ14738 602 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 HELBQ8NG08 1087 aaPredicted RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 DISP3Q9P2K9 1392 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 SNX16P57768 344 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 RSBN1LQ6PCB5 846 aaPredicted RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 DHX32Q7L7V1 743 aaKnown RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 SDCCAG3Q96C92 435 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 CYTH2Q99418 400 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 LLPHQ9BRT6 129 aaKnown RBP6.23□□□□□ -1.41
CSMD1-215ENST00000537824 IFT122Q9HBG6 1241 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 AGTPBP1Q9UPW5 1226 aa6.23□□□□□ -1.41
CSMD1-215ENST00000537824 NAPAP54920 295 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 OTUD7BQ6GQQ9 843 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 NUDCD1Q96RS6 583 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 HELLSQ9NRZ9 838 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 BRD1O95696 1058 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 EPB41P11171 864 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 TATP17735 454 aaPredicted RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 DTHD1Q6ZMT9 781 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 TRMT1LQ7Z2T5 733 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ZSCAN29Q8IWY8 852 aaPredicted RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 NME8Q8N427 588 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 KIF14Q15058 1648 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 RPS6KA2Q15349 733 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 PPP2R5EQ16537 467 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ANKRD20A4Q4UJ75 823 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ANKRD20A8PQ5CZ79 823 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ANKRD20A2Q5SQ80 823 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 ANKRD20A1Q5TYW2 823 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 TMOD2Q9NZR1 351 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 KIF22Q14807 665 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 CNNM4Q6P4Q7 775 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 TMTC3Q6ZXV5 915 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 MRPL50Q8N5N7 158 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 KIFAP3Q92845 792 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 MSH2P43246 934 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 DHX9Q08211 1270 aaKnown RBP6.22□□□□□ -1.41
CSMD1-215ENST00000537824 SLC44A4Q53GD3 710 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 SRLQ86TD4 932 aa6.22□□□□□ -1.41
CSMD1-215ENST00000537824 SLC35F6Q8N357 371 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms