RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 HEATR3Q7Z4Q2 680 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 MTRQ99707 1265 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 CDCA7Q9BWT1 371 aaPredicted RBP8.5□□□□□ -1.05
NECAP1-203ENST00000537796 NARFQ9UHQ1 456 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 GDAQ9Y2T3 454 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 SOWAHDA6NJG2 315 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 PES1O00541 588 aaKnown RBP8.5□□□□□ -1.05
NECAP1-203ENST00000537796 RIMBP2O15034 1052 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 PRPF3O43395 683 aaKnown RBP8.5□□□□□ -1.05
NECAP1-203ENST00000537796 NEMFO60524 1076 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 ABL1P00519 1130 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 KMT5BQ4FZB7 885 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 RASSF8Q8NHQ8 419 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 WDR24Q96S15 920 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 MAP7D2Q96T17 732 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 BRIP1Q9BX63 1249 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 ANAPC4Q9UJX5 808 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 THRAP3Q9Y2W1 955 aaKnown RBP8.5□□□□□ -1.05
NECAP1-203ENST00000537796 PAXBP1Q9Y5B6 917 aa8.5□□□□□ -1.05
NECAP1-203ENST00000537796 LRP5O75197 1615 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 RTL9Q8NET4 1388 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 SCG2P13521 617 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 INF2Q27J81 1249 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 FBXO38Q6PIJ6 1188 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 CCDC150Q8NCX0 1101 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 UBA5Q9GZZ9 404 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 VPS16Q9H269 839 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 LZTFL1Q9NQ48 299 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 LRRC4BQ9NT99 713 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.49□□□□□ -1.05
NECAP1-203ENST00000537796 CACNA1SQ13698 1873 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 TRIM49BA6NDI0 452 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 UBAP1LF5GYI3 381 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 RNF225M0QZC1 329 aaPredicted RBP8.49□□□□□ -1.05
NECAP1-203ENST00000537796 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
NECAP1-203ENST00000537796 XBP1P17861 261 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 SARSP49591 514 aaKnown RBP8.49□□□□□ -1.05
NECAP1-203ENST00000537796 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 PNMA1Q8ND90 353 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 KAT14Q9H8E8 782 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 IMPACTQ9P2X3 320 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 XDHP47989 1333 aa8.49□□□□□ -1.05
NECAP1-203ENST00000537796 FAM237AA0A1B0GTK4 181 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 CYTH3O43739 400 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 RPS6KA4O75676 772 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 PICALMQ13492 652 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 RRAGBQ5VZM2 374 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 KLHL34Q8N239 644 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 TC2NQ8N9U0 490 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 TFR2Q9UP52 801 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 RAD21O60216 631 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 PHLPP1O60346 1717 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 UFL1O94874 794 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 TSPY3P0CV98 308 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 TSPY8P0CW00 308 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 GPSM2P81274 684 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 RBL2Q08999 1139 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 TMEM139Q8IV31 216 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 REXO1L1PQ8IX06 675 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 TNFRSF25Q93038 417 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 HPS3Q969F9 1004 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 GJA10Q969M2 543 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 BAG1Q99933 345 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-203ENST00000537796 TAB2Q9NYJ8 693 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 USP21Q9UK80 565 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 GNG11P61952 73 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 BARGINQ6ZT62 677 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 LRRC15Q8TF66 581 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 CARD6Q9BX69 1037 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 MRPL44Q9H9J2 332 aaKnown RBP8.48□□□□□ -1.05
NECAP1-203ENST00000537796 PPP2R2CQ9Y2T4 447 aa8.48□□□□□ -1.05
NECAP1-203ENST00000537796 FRMPD2Q68DX3 1309 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-203ENST00000537796 MYH6P13533 1939 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.47□□□□□ -1.05
NECAP1-203ENST00000537796 SLU7O95391 586 aaKnown RBP8.47□□□□□ -1.05
NECAP1-203ENST00000537796 SLFN14P0C7P3 912 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 ZNF18P17022 549 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 TRIM65Q6PJ69 517 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 CEP131Q9UPN4 1083 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 PLCH1Q4KWH8 1693 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 DOCK2Q92608 1830 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 PPP1R3GB7ZBB8 358 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 NKRFO15226 690 aaKnown RBP eCLIP8.47□□□□□ -1.05
NECAP1-203ENST00000537796 CBFA2T2O43439 604 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 TRAPPC3LQ5T215 181 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 WWC2Q6AWC2 1192 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 CNBD1Q8NA66 436 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 BRMS1Q9HCU9 246 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 ZNF219Q9P2Y4 722 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-203ENST00000537796 HOOK1Q9UJC3 728 aaKnown RBP8.47□□□□□ -1.05
NECAP1-203ENST00000537796 SYNRGQ9UMZ2 1314 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 C6orf229H3BNL8 230 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 SEC31AO94979 1220 aaKnown RBP8.47□□□□□ -1.05
NECAP1-203ENST00000537796 BTDP43251 543 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 SLC10A5Q5PT55 438 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 C12orf60Q5U649 245 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 SPECC1LQ69YQ0 1117 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 IGSF22Q8N9C0 903 aa8.47□□□□□ -1.05
NECAP1-203ENST00000537796 BCORQ6W2J9 1755 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms