RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 USP17L18D6R9N7 530 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 USP17L22D6RA61 530 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 USP17L17D6RBQ6 530 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 USP17L19D6RCP7 530 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 USP17L20D6RJB6 530 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 NMT2O60551 498 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 SP3Q02447 781 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 USP17L24Q0WX57 530 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 IMMTQ16891 758 aaKnown RBP17.94■□□□□ 0.46
SRRM4-202ENST00000537597 MFSD6Q6ZSS7 791 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 STOX1Q6ZVD7 989 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 PARK7Q99497 189 aaKnown RBP17.94■□□□□ 0.46
SRRM4-202ENST00000537597 RNF41Q9H4P4 317 aaPredicted RBP17.94■□□□□ 0.46
SRRM4-202ENST00000537597 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
SRRM4-202ENST00000537597 RBM8AQ9Y5S9 174 aaKnown RBP17.94■□□□□ 0.46
SRRM4-202ENST00000537597 F5H6K3 240 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 CNMDO75829 334 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 TTLL1O95922 423 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 TSPY3P0CV98 308 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 TSPY8P0CW00 308 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 KLRC3Q07444 240 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 PABPC4Q13310 644 aaKnown RBP eCLIP17.93■□□□□ 0.46
SRRM4-202ENST00000537597 TSGA10IPQ3SY00 556 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 GMCL1P1Q8NEA9 526 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 TTC14Q96N46 770 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 CLIP2Q9UDT6 1046 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 CPA4Q9UI42 421 aa17.93■□□□□ 0.46
SRRM4-202ENST00000537597 GCLCP48506 637 aaPredicted RBP17.92■□□□□ 0.46
SRRM4-202ENST00000537597 HERVK_113P62684 666 aa17.92■□□□□ 0.46
SRRM4-202ENST00000537597 COL9A3Q14050 684 aaPredicted RBP17.92■□□□□ 0.46
SRRM4-202ENST00000537597 RPAP3Q9H6T3 665 aaPredicted RBP17.92■□□□□ 0.46
SRRM4-202ENST00000537597 SH2D4AQ9H788 454 aa17.92■□□□□ 0.46
SRRM4-202ENST00000537597 TXNRD2Q9NNW7 524 aa17.92■□□□□ 0.46
SRRM4-202ENST00000537597 PNMA3Q9UL41 463 aa17.92■□□□□ 0.46
SRRM4-202ENST00000537597 TSPY2A6NKD2 308 aa17.91■□□□□ 0.46
SRRM4-202ENST00000537597 WDR46O15213 610 aaKnown RBP17.91■□□□□ 0.46
SRRM4-202ENST00000537597 RANBP6O60518 1105 aaKnown RBP17.91■□□□□ 0.46
SRRM4-202ENST00000537597 NDUFB10O96000 172 aa17.91■□□□□ 0.46
SRRM4-202ENST00000537597 OSBPP22059 807 aa17.91■□□□□ 0.46
SRRM4-202ENST00000537597 LACTBP83111 547 aaPredicted RBP17.91■□□□□ 0.46
SRRM4-202ENST00000537597 ZYXQ15942 572 aaKnown RBP17.91■□□□□ 0.46
SRRM4-202ENST00000537597 Q3C1V9 767 aa17.91■□□□□ 0.46
SRRM4-202ENST00000537597 MYPNQ86TC9 1320 aa17.91■□□□□ 0.46
SRRM4-202ENST00000537597 PARP14Q460N5 1801 aa17.91■□□□□ 0.46
SRRM4-202ENST00000537597 SPDYE16A6NNV3 312 aaPredicted RBP17.9■□□□□ 0.46
SRRM4-202ENST00000537597 E7EWF7 191 aa17.9■□□□□ 0.46
SRRM4-202ENST00000537597 EPB41L2O43491 1005 aaKnown RBP17.9■□□□□ 0.46
SRRM4-202ENST00000537597 COG2Q14746 738 aa17.9■□□□□ 0.46
SRRM4-202ENST00000537597 SEC23AQ15436 765 aa17.9■□□□□ 0.46
SRRM4-202ENST00000537597 FAM110CQ1W6H9 321 aa17.9■□□□□ 0.46
SRRM4-202ENST00000537597 PPP4R3BQ5MIZ7 849 aa17.9■□□□□ 0.46
SRRM4-202ENST00000537597 DGKHQ86XP1 1220 aa17.9■□□□□ 0.46
SRRM4-202ENST00000537597 ESR2Q92731 530 aa17.9■□□□□ 0.46
SRRM4-202ENST00000537597 B4E1Z4 1266 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 SLC27A2O14975 620 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 PLA2G6O60733 806 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 KDM4AO75164 1064 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 SNHG28P0DPA3 235 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 DSG3P32926 999 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 CYB5R4Q7L1T6 521 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 REPS2Q8NFH8 660 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 GMCL1Q96IK5 515 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 FEZ1Q99689 392 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 TMEM47Q9BQJ4 181 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 ARHGAP39Q9C0H5 1083 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 HOXC10Q9NYD6 342 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 RABGAP1Q9Y3P9 1069 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 MYH4Q9Y623 1939 aa17.89■□□□□ 0.45
SRRM4-202ENST00000537597 CREB3L3Q68CJ9 461 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 OTOP1Q7RTM1 612 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 CTU1Q7Z7A3 348 aaKnown RBP17.88■□□□□ 0.45
SRRM4-202ENST00000537597 MB21D2Q8IYB1 491 aaPredicted RBP17.88■□□□□ 0.45
SRRM4-202ENST00000537597 SPICE1Q8N0Z3 855 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 CD99L2Q8TCZ2 262 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 GTF3C2Q8WUA4 911 aaPredicted RBP17.88■□□□□ 0.45
SRRM4-202ENST00000537597 ERO1AQ96HE7 468 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 TRIM47Q96LD4 638 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 KRT23Q9C075 422 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 GOPCQ9HD26 462 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 BTBD7Q9P203 1132 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 A0A0G2JMZ2 1700 aa17.88■□□□□ 0.45
SRRM4-202ENST00000537597 PEX10O60683 326 aa17.87■□□□□ 0.45
SRRM4-202ENST00000537597 TOP1P11387 765 aaKnown RBP17.87■□□□□ 0.45
SRRM4-202ENST00000537597 ANTXR2P58335 489 aa17.87■□□□□ 0.45
SRRM4-202ENST00000537597 KIAA1211Q6ZU35 1233 aa17.87■□□□□ 0.45
SRRM4-202ENST00000537597 RASEFQ8IZ41 740 aa17.87■□□□□ 0.45
SRRM4-202ENST00000537597 ANKRD13CQ8N6S4 541 aa17.87■□□□□ 0.45
SRRM4-202ENST00000537597 GJD2Q9UKL4 321 aa17.87■□□□□ 0.45
SRRM4-202ENST00000537597 ZSWIM8A7E2V4 1837 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 GNRH1P01148 92 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 IRX3P78415 501 aaPredicted RBP17.86■□□□□ 0.45
SRRM4-202ENST00000537597 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
SRRM4-202ENST00000537597 FAM83BQ5T0W9 1011 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 SLFN13Q68D06 897 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 BTNL9Q6UXG8 535 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 LRRC47Q8N1G4 583 aaKnown RBP17.86■□□□□ 0.45
SRRM4-202ENST00000537597 ENAHQ8N8S7 591 aaPredicted RBP17.86■□□□□ 0.45
SRRM4-202ENST00000537597 IGDCC4Q8TDY8 1250 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms