RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PFKFB1P16118 471 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 NUDT16Q96DE0 195 aaKnown RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 PTH1RQ03431 593 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 SEPT14Q6ZU15 432 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 CCDC25Q86WR0 208 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 CACNA2D3Q8IZS8 1091 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 EIF1ADQ8N9N8 165 aaKnown RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 ENOX1Q8TC92 643 aaKnown RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 USP28Q96RU2 1077 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 VCXQ9H320 206 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 CHPF2Q9P2E5 772 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 WDR3Q9UNX4 943 aaKnown RBP eCLIP6□□□□□ -1.45
PTPRD-213ENST00000537002 PNMA6EA0A0J9YXQ4 647 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 IKQ13123 557 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 RUFY4Q6ZNE9 571 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ZNF662Q6ZS27 426 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 PLIN2Q99541 437 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 MCM8Q9UJA3 840 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 SAR1BQ9Y6B6 198 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 CLTCQ00610 1675 aaKnown RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 HMGB1P1B2RPK0 211 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ENC1O14682 589 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 PSMA7O14818 248 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 CLTAP09496 248 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 IRAK1P51617 712 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 PAK2Q13177 524 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 IFI16Q16666 785 aaKnown RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 METTL24Q5JXM2 366 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 KIF6Q6ZMV9 814 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 STMN2Q93045 179 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ZNF274Q96GC6 653 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ETAA1Q9NY74 926 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 PPP1R1BQ9UD71 204 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ALDH1L1O75891 902 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 FMR1NBQ8N0W7 255 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 CFAP61Q8NHU2 1237 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 LZICQ8WZA0 190 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 DDX21Q9NR30 783 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 WWC3Q9ULE0 1092 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ITIH6Q6UXX5 1313 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 DLC1Q96QB1 1528 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 USP14P54578 494 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ACTN3Q08043 901 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 SCRN1Q12765 414 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 POLA2Q14181 598 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ZNF827Q17R98 1081 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 SH2D4BQ5SQS7 431 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 EMC10Q5UCC4 262 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 SLC35F6Q8N357 371 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 FANCLQ9NW38 375 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 LRP2BPQ9P2M1 347 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 MAPK8IP1Q9UQF2 711 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 TMEM110-MUSTN1A8MSY1 372 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 LARGE1O95461 756 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 DYNC1I2Q13409 638 aaKnown RBP5.99□□□□□ -1.45
PTPRD-213ENST00000537002 DAAM2Q86T65 1068 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 SPAG5Q96R06 1193 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 UBA7P41226 1012 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ASIC1P78348 528 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 MPRIPQ6WCQ1 1025 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 TOM1L2Q6ZVM7 507 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 KRT28Q7Z3Y7 464 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 VCPKMTQ9H867 229 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 SLAIN2Q9P270 581 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 ITGB1BP2Q9UKP3 347 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 WDR17Q8IZU2 1322 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 KIF20BQ96Q89 1820 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 CEMIPQ8WUJ3 1361 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 H3BQF6 201 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 RIPK1Q13546 671 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 SEPT6Q14141 434 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 DPCR1Q3MIW9 517 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 RASGRP2Q7LDG7 609 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 RASEFQ8IZ41 740 aa5.99□□□□□ -1.45
PTPRD-213ENST00000537002 CDHR2Q9BYE9 1310 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 PPLO60437 1756 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 AHCYL1O43865 530 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 GSTA1P08263 222 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 KRT9P35527 623 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 PPP4R3AQ6IN85 833 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 FBXL16Q8N461 479 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 PGBD1Q96JS3 809 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 C8orf37Q96NL8 207 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 FTOQ9C0B1 505 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 STIM2Q9P246 746 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 DBF4Q9UBU7 674 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 PCDHA7Q9UN72 937 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 DIP2BQ9P265 1576 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 A2ML1A8K2U0 1454 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 KDRP35968 1356 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 TULP4Q9NRJ4 1543 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 KDM4FA0A1W2PPD8 638 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 PPP6R2O75170 966 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 CTNNA1P35221 906 aaKnown RBP5.98□□□□□ -1.45
PTPRD-213ENST00000537002 CEP128Q6ZU80 1094 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 TEX9Q8N6V9 391 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 GBP5Q96PP8 586 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 FOXO3O43524 673 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 IL13P35225 146 aa5.98□□□□□ -1.45
PTPRD-213ENST00000537002 MUM1Q2TAK8 710 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms