RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 BNIP3Q12983 259 aa8.83□□□□□ -1
CLIP1-207ENST00000536634 IFI16Q16666 785 aaKnown RBP8.83□□□□□ -1
CLIP1-207ENST00000536634 CDH24Q86UP0 819 aa8.83□□□□□ -1
CLIP1-207ENST00000536634 BCL7CQ8WUZ0 217 aaPredicted RBP8.83□□□□□ -1
CLIP1-207ENST00000536634 NT5C1AQ9BXI3 368 aa8.83□□□□□ -1
CLIP1-207ENST00000536634 GOLGA2P5Q9HBQ8 144 aa8.83□□□□□ -1
CLIP1-207ENST00000536634 MAPK8IP1Q9UQF2 711 aa8.83□□□□□ -1
CLIP1-207ENST00000536634 CARMIL1Q5VZK9 1371 aa8.83□□□□□ -1
CLIP1-207ENST00000536634 WDR7Q9Y4E6 1490 aa8.83□□□□□ -1
CLIP1-207ENST00000536634 NKPD1Q17RQ9 610 aa8.82□□□□□ -1
CLIP1-207ENST00000536634 ZNF574Q6ZN55 896 aaPredicted RBP8.82□□□□□ -1
CLIP1-207ENST00000536634 SPACA3Q8IXA5 215 aa8.82□□□□□ -1
CLIP1-207ENST00000536634 DNAJB8Q8NHS0 232 aa8.82□□□□□ -1
CLIP1-207ENST00000536634 PPP1R13LQ8WUF5 828 aa8.82□□□□□ -1
CLIP1-207ENST00000536634 TNKS2Q9H2K2 1166 aa8.82□□□□□ -1
CLIP1-207ENST00000536634 OAS3Q9Y6K5 1087 aaKnown RBP8.82□□□□□ -1
CLIP1-207ENST00000536634 MAGI3Q5TCQ9 1506 aa8.81□□□□□ -1
CLIP1-207ENST00000536634 CD96P40200 585 aa8.81□□□□□ -1
CLIP1-207ENST00000536634 YARSP54577 528 aaKnown RBP8.81□□□□□ -1
CLIP1-207ENST00000536634 CLCQ05315 142 aa8.81□□□□□ -1
CLIP1-207ENST00000536634 SPRED2Q7Z698 418 aa8.81□□□□□ -1
CLIP1-207ENST00000536634 CYB5D2Q8WUJ1 264 aa8.81□□□□□ -1
CLIP1-207ENST00000536634 LMTK3Q96Q04 1460 aa8.81□□□□□ -1
CLIP1-207ENST00000536634 CFAP43Q8NDM7 1665 aa8.81□□□□□ -1
CLIP1-207ENST00000536634 KIAA0556O60303 1618 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 GNAT3A8MTJ3 354 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 SFRP5Q5T4F7 317 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 GK5Q6ZS86 529 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 NT5DC4Q86YG4 428 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 SLITRK4Q8IW52 837 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 SLFN12Q8IYM2 578 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 FLCNQ8NFG4 579 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 NKD1Q969G9 470 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 PAK6Q9NQU5 681 aaPredicted RBP8.8□□□□□ -1
CLIP1-207ENST00000536634 PTPRMP28827 1452 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 ADAMTSL3P82987 1691 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 UGGT2Q9NYU1 1516 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 CD109Q6YHK3 1445 aa8.8□□□□□ -1
CLIP1-207ENST00000536634 ATE1O95260 518 aa8.79□□□□□ -1
CLIP1-207ENST00000536634 CBX7O95931 251 aa8.79□□□□□ -1
CLIP1-207ENST00000536634 ZNF865P0CJ78 1059 aaPredicted RBP8.79□□□□□ -1
CLIP1-207ENST00000536634 MCM4P33991 863 aa8.79□□□□□ -1
CLIP1-207ENST00000536634 EHMT1Q9H9B1 1298 aa8.79□□□□□ -1
CLIP1-207ENST00000536634 CEP131Q9UPN4 1083 aa8.79□□□□□ -1
CLIP1-207ENST00000536634 SLC5A6Q9Y289 635 aa8.79□□□□□ -1
CLIP1-207ENST00000536634 TMEM265A0A087WTH1 108 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 SLC22A31A6NKX4 558 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 PRKCQQ04759 706 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 AOC3Q16853 763 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 ZNF746Q6NUN9 644 aaPredicted RBP8.78□□□□□ -1
CLIP1-207ENST00000536634 C22orf34Q6ZV56 151 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 ABI1Q8IZP0 508 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 MFSD4AQ8N468 514 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 BAHD1Q8TBE0 780 aaPredicted RBP8.78□□□□□ -1
CLIP1-207ENST00000536634 MISP3Q96FF7 219 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 HRASLS5Q96KN8 279 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 VAV3Q9UKW4 847 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 CAPN6Q9Y6Q1 641 aa8.78□□□□□ -1
CLIP1-207ENST00000536634 PCF11O94913 1555 aaKnown RBP8.78□□□□□ -1
CLIP1-207ENST00000536634 ARSHQ5FYA8 562 aa8.77□□□□□ -1.01
CLIP1-207ENST00000536634 OVOS1Q6IE37 1185 aa8.77□□□□□ -1.01
CLIP1-207ENST00000536634 TP53INP2Q8IXH6 220 aa8.77□□□□□ -1.01
CLIP1-207ENST00000536634 ZNF654Q8IZM8 581 aa8.77□□□□□ -1.01
CLIP1-207ENST00000536634 STK11IPQ8N1F8 1099 aa8.77□□□□□ -1.01
CLIP1-207ENST00000536634 REXO1Q8N1G1 1221 aaKnown RBP8.77□□□□□ -1.01
CLIP1-207ENST00000536634 FBXL18Q96ME1 805 aa8.77□□□□□ -1.01
CLIP1-207ENST00000536634 KIF2CQ99661 725 aa8.77□□□□□ -1.01
CLIP1-207ENST00000536634 ANTXR1Q9H6X2 564 aa8.77□□□□□ -1.01
CLIP1-207ENST00000536634 FAM155AB1AL88 458 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-207ENST00000536634 CD8BP10966 210 aa8.76□□□□□ -1.01
CLIP1-207ENST00000536634 ETV3P41162 512 aa8.76□□□□□ -1.01
CLIP1-207ENST00000536634 ZNF165P49910 485 aa8.76□□□□□ -1.01
CLIP1-207ENST00000536634 PHACTR4Q8IZ21 702 aa8.76□□□□□ -1.01
CLIP1-207ENST00000536634 HSPA12BQ96MM6 686 aa8.76□□□□□ -1.01
CLIP1-207ENST00000536634 GMIPQ9P107 970 aa8.76□□□□□ -1.01
CLIP1-207ENST00000536634 MADDQ8WXG6 1647 aa8.76□□□□□ -1.01
CLIP1-207ENST00000536634 CYP7A1P22680 504 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 RBM25P49756 843 aaKnown RBP8.75□□□□□ -1.01
CLIP1-207ENST00000536634 TNK2Q07912 1038 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 PAK2Q13177 524 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 CDKAL1Q5VV42 579 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 CCDC74BQ96LY2 380 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 Q96M66 194 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-207ENST00000536634 SNX11Q9Y5W9 270 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 ST14Q9Y5Y6 855 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 PITPNM2Q9BZ72 1349 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 ARAP3Q8WWN8 1544 aa8.75□□□□□ -1.01
CLIP1-207ENST00000536634 BCORL1Q5H9F3 1711 aa8.74□□□□□ -1.01
CLIP1-207ENST00000536634 ABCA8O94911 1581 aa8.74□□□□□ -1.01
CLIP1-207ENST00000536634 POLR2BP30876 1174 aaKnown RBP8.74□□□□□ -1.01
CLIP1-207ENST00000536634 CLCN7P51798 805 aa8.74□□□□□ -1.01
CLIP1-207ENST00000536634 RAD51AP2Q09MP3 1159 aa8.74□□□□□ -1.01
CLIP1-207ENST00000536634 MLECQ14165 292 aa8.74□□□□□ -1.01
CLIP1-207ENST00000536634 SEMA3GQ9NS98 782 aa8.74□□□□□ -1.01
CLIP1-207ENST00000536634 H3BS24 57 aa8.73□□□□□ -1.01
CLIP1-207ENST00000536634 LRRN2O75325 713 aa8.73□□□□□ -1.01
CLIP1-207ENST00000536634 KIR3DL1P43629 444 aa8.73□□□□□ -1.01
CLIP1-207ENST00000536634 TNNI2P48788 182 aa8.73□□□□□ -1.01
CLIP1-207ENST00000536634 ATG4CQ96DT6 458 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms