RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KANSL2Q9H9L4 492 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 ARHGEF10LQ9HCE6 1279 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
PRKDC-206ENST00000536429 SPDYE16A6NNV3 312 aaPredicted RBP15.67■□□□□ 0.1
PRKDC-206ENST00000536429 TNPO2O14787 897 aaKnown RBP15.67■□□□□ 0.1
PRKDC-206ENST00000536429 ZNF444Q8N0Y2 327 aaPredicted RBP15.67■□□□□ 0.1
PRKDC-206ENST00000536429 DIAPH3Q9NSV4 1193 aa15.67■□□□□ 0.1
PRKDC-206ENST00000536429 MYCP01106 439 aaPredicted RBP15.66■□□□□ 0.1
PRKDC-206ENST00000536429 HOXD10P28358 340 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 FLT3LGP49771 235 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 HAND2P61296 217 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 ERVK-9P63128 1117 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 ERVK-24P63145 666 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 SLC9C1Q4G0N8 1177 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 GPRC5AQ8NFJ5 357 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 NKX2-3Q8TAU0 364 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 RAET1EQ8TD07 263 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 CEP95Q96GE4 821 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 ZNF333Q96JL9 665 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 TANGO6Q9C0B7 1094 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 PORCNQ9H237 461 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 BTBD7Q9P203 1132 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 ANAPC4Q9UJX5 808 aa15.66■□□□□ 0.1
PRKDC-206ENST00000536429 PRMT2P55345 433 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 TFAP4Q01664 338 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 PDE4BQ07343 736 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 NEDD1Q8NHV4 660 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 LPAR1Q92633 364 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 NUP88Q99567 741 aaPredicted RBP15.65■□□□□ 0.1
PRKDC-206ENST00000536429 SH2D4AQ9H788 454 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 FBXO28Q9NVF7 368 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 NYAP2Q9P242 653 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
PRKDC-206ENST00000536429 GREB1LQ9C091 1923 aaPredicted RBP15.64■□□□□ 0.09
PRKDC-206ENST00000536429 PLIN4Q96Q06 1357 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 POTEFA5A3E0 1075 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 RAD21O60216 631 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 NMT2O60551 498 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 SLC3A2P08195 630 aaKnown RBP15.64■□□□□ 0.09
PRKDC-206ENST00000536429 TSPY3P0CV98 308 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 TSPY8P0CW00 308 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 RGS19P49795 217 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 LBX2Q6XYB7 198 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 TBC1D10CQ8IV04 446 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 LRRC47Q8N1G4 583 aaKnown RBP15.64■□□□□ 0.09
PRKDC-206ENST00000536429 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 MTMR4Q9NYA4 1195 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 GJD2Q9UKL4 321 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 RABGAP1Q9Y3P9 1069 aa15.64■□□□□ 0.09
PRKDC-206ENST00000536429 HIP1O00291 1037 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 WDR46O15213 610 aaKnown RBP15.63■□□□□ 0.09
PRKDC-206ENST00000536429 NDUFB10O96000 172 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 FGRP09769 529 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 ELNP15502 786 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 GRK4P32298 578 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 DSG3P32926 999 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 COG2Q14746 738 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 MTFR1Q15390 333 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 FAM83BQ5T0W9 1011 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
PRKDC-206ENST00000536429 GTF3C2Q8WUA4 911 aaPredicted RBP15.63■□□□□ 0.09
PRKDC-206ENST00000536429 COA7Q96BR5 231 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 ATG4CQ96DT6 458 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 IL17RBQ9NRM6 502 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 ZMYM6O95789 1325 aa15.63■□□□□ 0.09
PRKDC-206ENST00000536429 MYH8P13535 1937 aa15.62■□□□□ 0.09
PRKDC-206ENST00000536429 F5H6K3 240 aa15.62■□□□□ 0.09
PRKDC-206ENST00000536429 ORC4O43929 436 aa15.62■□□□□ 0.09
PRKDC-206ENST00000536429 FLOT1O75955 427 aa15.62■□□□□ 0.09
PRKDC-206ENST00000536429 CHMLP26374 656 aa15.62■□□□□ 0.09
PRKDC-206ENST00000536429 KLRC3Q07444 240 aa15.62■□□□□ 0.09
PRKDC-206ENST00000536429 CENPQQ7L2Z9 268 aaPredicted RBP15.62■□□□□ 0.09
PRKDC-206ENST00000536429 GOPCQ9HD26 462 aa15.62■□□□□ 0.09
PRKDC-206ENST00000536429 TSPY2A6NKD2 308 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 ADCY3O60266 1144 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 RANBP6O60518 1105 aaKnown RBP15.61■□□□□ 0.09
PRKDC-206ENST00000536429 TTLL1O95922 423 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 MFAP1P55081 439 aaKnown RBP15.61■□□□□ 0.09
PRKDC-206ENST00000536429 IRF5Q13568 498 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 RRP12Q5JTH9 1297 aaKnown RBP15.61■□□□□ 0.09
PRKDC-206ENST00000536429 GPR142Q7Z601 462 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 NBPF11Q86T75 865 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 MKL1Q969V6 931 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 CHMP4CQ96CF2 233 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 HOXC10Q9NYD6 342 aa15.61■□□□□ 0.09
PRKDC-206ENST00000536429 KIAA0100Q14667 2235 aaKnown RBP15.61■□□□□ 0.09
PRKDC-206ENST00000536429 DOCK3Q8IZD9 2030 aa15.6■□□□□ 0.09
PRKDC-206ENST00000536429 MAPK4P31152 587 aa15.6■□□□□ 0.09
PRKDC-206ENST00000536429 RASGRP2Q7LDG7 609 aa15.6■□□□□ 0.09
PRKDC-206ENST00000536429 SLAIN1Q8ND83 568 aa15.6■□□□□ 0.09
PRKDC-206ENST00000536429 DSCC1Q9BVC3 393 aa15.6■□□□□ 0.09
PRKDC-206ENST00000536429 MOV10L1Q9BXT6 1211 aaKnown RBP15.6■□□□□ 0.09
PRKDC-206ENST00000536429 TOMM22Q9NS69 142 aa15.6■□□□□ 0.09
PRKDC-206ENST00000536429 NEDD4P46934 1319 aa15.6■□□□□ 0.09
PRKDC-206ENST00000536429 MGAMO43451 1857 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 EN2P19622 333 aaPredicted RBP15.59■□□□□ 0.09
PRKDC-206ENST00000536429 CYP2B6P20813 491 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 TRIM32Q13049 653 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 TMEM132BQ14DG7 1078 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms