RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PPARAQ07869 468 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 MCMDC2Q4G0Z9 681 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 ZNF589Q86UQ0 364 aaPredicted RBP17.03■□□□□ 0.32
UBE3B-206ENST00000536398 NAPBQ9H115 298 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 PORCNQ9H237 461 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 ARHGEF10LQ9HCE6 1279 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 GJD2Q9UKL4 321 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 TACC3Q9Y6A5 838 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 MGAMO43451 1857 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 ADCY3O60266 1144 aa17.02■□□□□ 0.32
UBE3B-206ENST00000536398 SDSP20132 328 aa17.02■□□□□ 0.32
UBE3B-206ENST00000536398 CTDSPL2Q05D32 466 aa17.02■□□□□ 0.32
UBE3B-206ENST00000536398 COA7Q96BR5 231 aa17.02■□□□□ 0.32
UBE3B-206ENST00000536398 TANGO6Q9C0B7 1094 aa17.02■□□□□ 0.32
UBE3B-206ENST00000536398 VCPKMTQ9H867 229 aa17.02■□□□□ 0.32
UBE3B-206ENST00000536398 BTBD7Q9P203 1132 aa17.02■□□□□ 0.32
UBE3B-206ENST00000536398 DOCK3Q8IZD9 2030 aa17.01■□□□□ 0.31
UBE3B-206ENST00000536398 SPDYE16A6NNV3 312 aaPredicted RBP17.01■□□□□ 0.31
UBE3B-206ENST00000536398 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
UBE3B-206ENST00000536398 ZNF444Q8N0Y2 327 aaPredicted RBP17.01■□□□□ 0.31
UBE3B-206ENST00000536398 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
UBE3B-206ENST00000536398 MYH8P13535 1937 aa17.01■□□□□ 0.31
UBE3B-206ENST00000536398 IGKV6D-41A0A0C4DH26 115 aa17■□□□□ 0.31
UBE3B-206ENST00000536398 RAD21O60216 631 aa17■□□□□ 0.31
UBE3B-206ENST00000536398 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
UBE3B-206ENST00000536398 BIN2Q9UBW5 565 aaPredicted RBP17■□□□□ 0.31
UBE3B-206ENST00000536398 RABGAP1Q9Y3P9 1069 aa17■□□□□ 0.31
UBE3B-206ENST00000536398 FGAP02671 866 aa16.99■□□□□ 0.31
UBE3B-206ENST00000536398 HSPD1P10809 573 aaKnown RBP16.99■□□□□ 0.31
UBE3B-206ENST00000536398 IRF5Q13568 498 aa16.99■□□□□ 0.31
UBE3B-206ENST00000536398 COG2Q14746 738 aa16.99■□□□□ 0.31
UBE3B-206ENST00000536398 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
UBE3B-206ENST00000536398 PIAS4Q8N2W9 510 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-206ENST00000536398 SLAIN1Q8ND83 568 aa16.99■□□□□ 0.31
UBE3B-206ENST00000536398 GTF3C2Q8WUA4 911 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-206ENST00000536398 LPAR1Q92633 364 aa16.99■□□□□ 0.31
UBE3B-206ENST00000536398 SH2D4AQ9H788 454 aa16.99■□□□□ 0.31
UBE3B-206ENST00000536398 CLIP2Q9UDT6 1046 aa16.99■□□□□ 0.31
UBE3B-206ENST00000536398 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
UBE3B-206ENST00000536398 CCL5P13501 91 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 GSPT1P15170 499 aaKnown RBP16.98■□□□□ 0.31
UBE3B-206ENST00000536398 CYP2B6P20813 491 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 TFAP4Q01664 338 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 PDE4BQ07343 736 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 TRIM32Q13049 653 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 ALX1Q15699 326 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 CWC27Q6UX04 472 aaKnown RBP16.98■□□□□ 0.31
UBE3B-206ENST00000536398 GPR142Q7Z601 462 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
UBE3B-206ENST00000536398 UNC93B1Q9H1C4 597 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 FBXO28Q9NVF7 368 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 HOXC10Q9NYD6 342 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 NYAP2Q9P242 653 aa16.98■□□□□ 0.31
UBE3B-206ENST00000536398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
UBE3B-206ENST00000536398 KIAA0100Q14667 2235 aaKnown RBP16.98■□□□□ 0.31
UBE3B-206ENST00000536398 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 WDR46O15213 610 aaKnown RBP16.97■□□□□ 0.31
UBE3B-206ENST00000536398 FLOT1O75955 427 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 INHAP05111 366 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
UBE3B-206ENST00000536398 MAPK4P31152 587 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 DSG3P32926 999 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 FAM83BQ5T0W9 1011 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 PLEKHH3Q7Z736 793 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 NEDD1Q8NHV4 660 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 PXYLP1Q8TE99 480 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 ATG4CQ96DT6 458 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 ZNF287Q9HBT7 754 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 MTMR4Q9NYA4 1195 aa16.97■□□□□ 0.31
UBE3B-206ENST00000536398 GREB1LQ9C091 1923 aaPredicted RBP16.97■□□□□ 0.31
UBE3B-206ENST00000536398 NDUFB10O96000 172 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 HAND2P61296 217 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 MORN1Q5T089 497 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 TTC22Q5TAA0 569 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 WDR78Q5VTH9 848 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
UBE3B-206ENST00000536398 USP6NLQ92738 828 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 NUDT12Q9BQG2 462 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 RNF208Q9H0X6 261 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 GOPCQ9HD26 462 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 ANAPC4Q9UJX5 808 aa16.96■□□□□ 0.31
UBE3B-206ENST00000536398 PLXNB2O15031 1838 aa16.96■□□□□ 0.3
UBE3B-206ENST00000536398 F5H6K3 240 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 NMT2O60551 498 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 UBXN2AP68543 259 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 KLRC3Q07444 240 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 LRRC47Q8N1G4 583 aaKnown RBP16.95■□□□□ 0.3
UBE3B-206ENST00000536398 NKX2-3Q8TAU0 364 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 TRIB2Q92519 343 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 MKL1Q969V6 931 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 MOV10L1Q9BXT6 1211 aaKnown RBP16.95■□□□□ 0.3
UBE3B-206ENST00000536398 NBPF3Q9H094 633 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 IL25Q9H293 177 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms