RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
TNC-209ENST00000534839 ALADP13716 330 aa12.85□□□□□ -0.35
TNC-209ENST00000534839 TLE2Q04725 743 aa12.85□□□□□ -0.35
TNC-209ENST00000534839 TREML2Q5T2D2 321 aa12.85□□□□□ -0.35
TNC-209ENST00000534839 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
TNC-209ENST00000534839 GJD3Q8N144 294 aa12.85□□□□□ -0.35
TNC-209ENST00000534839 DDX20Q9UHI6 824 aaKnown RBP12.85□□□□□ -0.35
TNC-209ENST00000534839 AGTPBP1Q9UPW5 1226 aa12.85□□□□□ -0.35
TNC-209ENST00000534839 RAG1P15918 1043 aa12.84□□□□□ -0.35
TNC-209ENST00000534839 RPIAP49247 311 aa12.84□□□□□ -0.35
TNC-209ENST00000534839 KCNH2Q12809 1159 aa12.84□□□□□ -0.35
TNC-209ENST00000534839 MFSD14BQ5SR56 506 aa12.84□□□□□ -0.35
TNC-209ENST00000534839 C15orf52Q6ZUT6 534 aaKnown RBP12.84□□□□□ -0.35
TNC-209ENST00000534839 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
TNC-209ENST00000534839 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
TNC-209ENST00000534839 DCHS1Q96JQ0 3298 aa12.84□□□□□ -0.35
TNC-209ENST00000534839 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
TNC-209ENST00000534839 BAHCC1Q9P281 2608 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
TNC-209ENST00000534839 GCLCP48506 637 aaPredicted RBP12.83□□□□□ -0.36
TNC-209ENST00000534839 CHRNDQ07001 517 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 GRIK5Q16478 980 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 RASIP1Q5U651 963 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 HFE2Q6ZVN8 426 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 ZNF804AQ7Z570 1209 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 USP6NLQ92738 828 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 YBX2Q9Y2T7 364 aaKnown RBP12.83□□□□□ -0.36
TNC-209ENST00000534839 MTCH2Q9Y6C9 303 aa12.83□□□□□ -0.36
TNC-209ENST00000534839 CACNA1BQ00975 2339 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 KMT2BQ9UMN6 2715 aaPredicted RBP12.82□□□□□ -0.36
TNC-209ENST00000534839 KIAA0355O15063 1070 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 TAF5LO75529 589 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 CLTBP09497 229 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 PTPRAP18433 802 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 CTHP32929 405 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 RAB30Q15771 203 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 C16orf59Q7L2K0 433 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 SOCS4Q8WXH5 440 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 MYD88Q99836 296 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 TMOD2Q9NZR1 351 aa12.82□□□□□ -0.36
TNC-209ENST00000534839 RFXAPO00287 272 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 PEX10O60683 326 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 CNGA1P29973 690 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
TNC-209ENST00000534839 TMEM240Q5SV17 173 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 FKBP1CQ5VVH2 108 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 SCYL3Q8IZE3 742 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 PTPRFP10586 1907 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
TNC-209ENST00000534839 MYO9BQ13459 2157 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 ZNF318Q5VUA4 2279 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 TRIM75PA6NK02 468 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 ZBTB24O43167 697 aaPredicted RBP12.8□□□□□ -0.36
TNC-209ENST00000534839 MSCO60682 206 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 ADCYAP1R1P41586 468 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 KRT24Q2M2I5 525 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 KRT40Q6A162 431 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 TRIM67Q6ZTA4 783 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 ZNF598Q86UK7 904 aaKnown RBP12.8□□□□□ -0.36
TNC-209ENST00000534839 FAM178BQ8IXR5 827 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 FAM86C1Q9NVL1 165 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
TNC-209ENST00000534839 MORF4L1Q9UBU8 362 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 NUDCQ9Y266 331 aa12.8□□□□□ -0.36
TNC-209ENST00000534839 KBTBD13C9JR72 458 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 POU3F3P20264 500 aaPredicted RBP12.79□□□□□ -0.36
TNC-209ENST00000534839 RGS2P41220 211 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 ID4P47928 161 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 SKOR1P84550 965 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 KCTD2Q14681 263 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 ARRDC4Q8NCT1 418 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 EPS8L1Q8TE68 723 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 FAM151AQ8WW52 585 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 FLRT1Q9NZU1 646 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 SPTBN4Q9H254 2564 aa12.79□□□□□ -0.36
TNC-209ENST00000534839 MYBBP1AQ9BQG0 1328 aaKnown RBP12.79□□□□□ -0.36
TNC-209ENST00000534839 PHF20L1A8MW92 1017 aa12.78□□□□□ -0.36
TNC-209ENST00000534839 DCXO43602 365 aa12.78□□□□□ -0.36
TNC-209ENST00000534839 CD2BP2O95400 341 aaKnown RBP12.78□□□□□ -0.36
TNC-209ENST00000534839 TCF15Q12870 199 aa12.78□□□□□ -0.36
TNC-209ENST00000534839 APOBEC3HQ6NTF7 200 aaKnown RBP12.78□□□□□ -0.36
TNC-209ENST00000534839 CCDC84Q86UT8 332 aaPredicted RBP12.78□□□□□ -0.36
TNC-209ENST00000534839 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
TNC-209ENST00000534839 MFSD14AQ96MC6 490 aa12.78□□□□□ -0.36
TNC-209ENST00000534839 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
TNC-209ENST00000534839 APBA2Q99767 749 aa12.78□□□□□ -0.36
TNC-209ENST00000534839 TMEM39AQ9NV64 488 aa12.78□□□□□ -0.36
TNC-209ENST00000534839 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.78□□□□□ -0.36
TNC-209ENST00000534839 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
TNC-209ENST00000534839 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.37
TNC-209ENST00000534839 GBF1Q92538 1859 aa12.77□□□□□ -0.37
TNC-209ENST00000534839 MED19A0JLT2 244 aaPredicted RBP12.77□□□□□ -0.37
TNC-209ENST00000534839 COL9A2Q14055 689 aaPredicted RBP12.77□□□□□ -0.37
TNC-209ENST00000534839 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms