RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 RASA1P20936 1047 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 CRKP46108 304 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 CDK8P49336 464 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 SCNN1DP51172 638 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 TROAPQ12815 778 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 SLC4A8Q2Y0W8 1093 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 SOGA3Q5TF21 947 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 BRAPQ7Z569 592 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 CRACR2BQ8N4Y2 399 aaPredicted RBP7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 ZDHHC15Q96MV8 337 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 MAP3K14Q99558 947 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 SLC26A6Q9BXS9 759 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 RNF26Q9BY78 433 aaPredicted RBP7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 KCNQ5Q9NR82 932 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 USP40Q9NVE5 1235 aa7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 RBM27Q9P2N5 1060 aaKnown RBP7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
NPIPA1-204ENST00000534720 GRXCR2A6NFK2 248 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 TSPY3P0CV98 308 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 TSPY8P0CW00 308 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 POLD1P28340 1107 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 TRIM29Q14134 588 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 KRT40Q6A162 431 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 OTUD7BQ6GQQ9 843 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 RCSD1Q6JBY9 416 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 APOBEC3HQ6NTF7 200 aaKnown RBP7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 CDC42EP5Q6NZY7 148 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 MTFR1LQ9H019 292 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 IL17RBQ9NRM6 502 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 SERPINA10Q9UK55 444 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 RCOR1Q9UKL0 485 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 MYO3BQ8WXR4 1341 aa7.55□□□□□ -1.2
NPIPA1-204ENST00000534720 PRPF3O43395 683 aaKnown RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 NMT2O60551 498 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 WDHD1O75717 1129 aaPredicted RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 KIF23Q02241 960 aaPredicted RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 GABPAQ06546 454 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 CCDC183Q5T5S1 534 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 GPR153Q6NV75 609 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 KIAA0825Q8IV33 1275 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 CTCFLQ8NI51 663 aaPredicted RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 ZC3H15Q8WU90 426 aaKnown RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 DDX12PQ92771 950 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 AIFM3Q96NN9 605 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 ZMYND15Q9H091 742 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 OSBPL5Q9H0X9 879 aaPredicted RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 KAT14Q9H8E8 782 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 DDX4Q9NQI0 724 aaKnown RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 PIM2Q9P1W9 311 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 PLIN4Q96Q06 1357 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 DICER1Q9UPY3 1922 aaKnown RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 GOLGA6L4A6NEF3 574 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 YDJCA8MPS7 323 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 SNPHO15079 494 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 LETM1O95202 739 aaPredicted RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 ZBTB7AO95365 584 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 U2AF2P26368 475 aaKnown RBP eCLIP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 MRE11P49959 708 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 AKAP17AQ02040 695 aaKnown RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 FUT2Q10981 343 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 PICALMQ13492 652 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 RBM26Q5T8P6 1007 aaKnown RBP7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 MYSM1Q5VVJ2 828 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 LRSAM1Q6UWE0 723 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 TMTC3Q6ZXV5 915 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 ZNF710Q8N1W2 664 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 SLC44A5Q8NCS7 719 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 PNMA1Q8ND90 353 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 USP28Q96RU2 1077 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 IDI2Q9BXS1 227 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 SLC24A3Q9HC58 644 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 GJB4Q9NTQ9 266 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 RTEL1Q9NZ71 1219 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 SWAP70Q9UH65 585 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 COL4A5P29400 1685 aa7.54□□□□□ -1.2
NPIPA1-204ENST00000534720 CNTNAP5Q8WYK1 1306 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 KIF28PB7ZC32 967 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 PLEKHA8P1O95397 391 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 MMP1P03956 469 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 HLA-DOAP06340 250 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 XBP1P17861 261 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 KIF5BP33176 963 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 NOVP48745 357 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 GNAQP50148 359 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 GRM4Q14833 912 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 SAFBQ15424 915 aaKnown RBP eCLIP7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 PGBD1Q96JS3 809 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 COL2A1P02458 1487 aaPredicted RBP7.53□□□□□ -1.2
NPIPA1-204ENST00000534720 SYCE3A1L190 88 aa7.52□□□□□ -1.2
NPIPA1-204ENST00000534720 UBE2Q2LH0YL09 131 aa7.52□□□□□ -1.2
NPIPA1-204ENST00000534720 YEATS4O95619 227 aa7.52□□□□□ -1.2
NPIPA1-204ENST00000534720 VIL1P09327 827 aaKnown RBP7.52□□□□□ -1.2
NPIPA1-204ENST00000534720 NASPP49321 788 aaPredicted RBP7.52□□□□□ -1.2
NPIPA1-204ENST00000534720 GNL2Q13823 731 aaKnown RBP7.52□□□□□ -1.2
NPIPA1-204ENST00000534720 PKN1Q16512 942 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms