RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MKL1Q969V6 931 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 RNF208Q9H0X6 261 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 DIS3Q9Y2L1 958 aaKnown RBP12.43□□□□□ -0.42
CSDE1-217ENST00000534699 NDUFB9Q9Y6M9 179 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 OLFML2BQ68BL8 750 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 CCDC84Q86UT8 332 aaPredicted RBP12.43□□□□□ -0.42
CSDE1-217ENST00000534699 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.43□□□□□ -0.429e-6■■□□□ 13.2
CSDE1-217ENST00000534699 RPAP3Q9H6T3 665 aaPredicted RBP12.43□□□□□ -0.42
CSDE1-217ENST00000534699 NR2E3Q9Y5X4 410 aa12.43□□□□□ -0.42
CSDE1-217ENST00000534699 A0A1W2PPC1 479 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 GSG1L2A8MUP6 293 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 CNMDO75829 334 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 ZKSCAN1P17029 563 aaPredicted RBP12.42□□□□□ -0.42
CSDE1-217ENST00000534699 MFAP1P55081 439 aaKnown RBP12.42□□□□□ -0.42
CSDE1-217ENST00000534699 GPR142Q7Z601 462 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 MSL3Q8N5Y2 521 aaKnown RBP12.42□□□□□ -0.42
CSDE1-217ENST00000534699 U2AF1L4Q8WU68 220 aaKnown RBP12.42□□□□□ -0.42
CSDE1-217ENST00000534699 TANGO6Q9C0B7 1094 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 MAF1Q9H063 256 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 PNMA2Q9UL42 364 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 FRMPD3Q5JV73 1810 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 SPDYE16A6NNV3 312 aaPredicted RBP12.42□□□□□ -0.42
CSDE1-217ENST00000534699 SLURP2P0DP57 97 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 PDE4BQ07343 736 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 GRB14Q14449 540 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 MFSD14CQ5VZR4 134 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 RCSD1Q6JBY9 416 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 SHISA4Q96DD7 197 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 PUS7LQ9H0K6 701 aaKnown RBP12.42□□□□□ -0.42
CSDE1-217ENST00000534699 OSBPL3Q9H4L5 887 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 IVNS1ABPQ9Y6Y0 642 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 DOCK3Q8IZD9 2030 aa12.42□□□□□ -0.42
CSDE1-217ENST00000534699 MYH4Q9Y623 1939 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
CSDE1-217ENST00000534699 PLA2G6O60733 806 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 FARP2O94887 1054 aaPredicted RBP12.41□□□□□ -0.42
CSDE1-217ENST00000534699 IGHA2P01877 340 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 CWC22Q9HCG8 908 aaKnown RBP12.41□□□□□ -0.42
CSDE1-217ENST00000534699 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.41□□□□□ -0.42
CSDE1-217ENST00000534699 OGDHLQ9ULD0 1010 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 IGKV6D-41A0A0C4DH26 115 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 HIP1O00291 1037 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 MPHOSPH10O00566 681 aaKnown RBP12.41□□□□□ -0.42
CSDE1-217ENST00000534699 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 GPAA1O43292 621 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 UNC93B1Q9H1C4 597 aa12.41□□□□□ -0.42
CSDE1-217ENST00000534699 OAZ1P54368 228 aa12.4□□□□□ -0.42
CSDE1-217ENST00000534699 GMCL1P1Q8NEA9 526 aa12.4□□□□□ -0.42
CSDE1-217ENST00000534699 ACER1Q8TDN7 264 aa12.4□□□□□ -0.42
CSDE1-217ENST00000534699 EDC3Q96F86 508 aaKnown RBP12.4□□□□□ -0.42
CSDE1-217ENST00000534699 AKR1B1P15121 316 aa12.4□□□□□ -0.42
CSDE1-217ENST00000534699 MTFR1Q15390 333 aa12.4□□□□□ -0.42
CSDE1-217ENST00000534699 ZNF444Q8N0Y2 327 aaPredicted RBP12.4□□□□□ -0.42
CSDE1-217ENST00000534699 OSBP2Q969R2 916 aa12.4□□□□□ -0.42
CSDE1-217ENST00000534699 TXNRD2Q9NNW7 524 aa12.4□□□□□ -0.42
CSDE1-217ENST00000534699 PRKAB2O43741 272 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 RASA1P20936 1047 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 IFNL3Q8IZI9 196 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 CRBNQ96SW2 442 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 FSD1Q9BTV5 496 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 MKNK2Q9HBH9 465 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 TDO2P48775 406 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 RIOX2Q8IUF8 465 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 SIAH1Q8IUQ4 282 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 SPATC1LQ9H0A9 340 aa12.39□□□□□ -0.43
CSDE1-217ENST00000534699 A0A1W2PRG0 241 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 TFRCP02786 760 aaKnown RBP12.38□□□□□ -0.43
CSDE1-217ENST00000534699 FGRP09769 529 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 CYP2D6P10635 497 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 PDE1AP54750 535 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 TKFCQ3LXA3 575 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 CCDC178Q5BJE1 867 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 ZNFX1Q9P2E3 1918 aaKnown RBP12.38□□□□□ -0.43
CSDE1-217ENST00000534699 EEF2P13639 858 aaKnown RBP12.38□□□□□ -0.43
CSDE1-217ENST00000534699 Q3C1V9 767 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 FAM160B2Q86V87 743 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 FEM1BQ9UK73 627 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 PPP1R9AQ9ULJ8 1098 aa12.38□□□□□ -0.43
CSDE1-217ENST00000534699 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 ORC4O43929 436 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 NOVP48745 357 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 ANKRD45Q5TZF3 282 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 TRIB2Q92519 343 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 DYNLL2Q96FJ2 89 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 PAGR1Q9BTK6 254 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 NAPBQ9H115 298 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 FBXO40Q9UH90 709 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
CSDE1-217ENST00000534699 LOC102724159A0A0B4J2E5 919 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 ELNP15502 786 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 PWP2Q15269 919 aaKnown RBP12.37□□□□□ -0.43
CSDE1-217ENST00000534699 ZNF467Q7Z7K2 595 aaPredicted RBP12.37□□□□□ -0.43
CSDE1-217ENST00000534699 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
CSDE1-217ENST00000534699 PLXNA1Q9UIW2 1896 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms