RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 CCDC144BQ3MJ40 725 aa5.09□□□□□ -1.59
CSMD3-210ENST00000534172 LRP10Q7Z4F1 713 aa5.09□□□□□ -1.59
CSMD3-210ENST00000534172 TTC6Q86TZ1 520 aa5.09□□□□□ -1.59
CSMD3-210ENST00000534172 FBXL6Q8N531 539 aa5.09□□□□□ -1.59
CSMD3-210ENST00000534172 PPP1R13LQ8WUF5 828 aa5.09□□□□□ -1.59
CSMD3-210ENST00000534172 MKL1Q969V6 931 aa5.09□□□□□ -1.59
CSMD3-210ENST00000534172 KREMEN1Q96MU8 473 aa5.09□□□□□ -1.59
CSMD3-210ENST00000534172 ASCC2Q9H1I8 757 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-210ENST00000534172 ZNF408Q9H9D4 720 aa5.09□□□□□ -1.59
CSMD3-210ENST00000534172 SUCOQ9UBS9 1254 aaKnown RBP5.09□□□□□ -1.59
CSMD3-210ENST00000534172 A0A1W2PQH9 124 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 SMAD7O15105 426 aaKnown RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 NCLP19338 710 aaKnown RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 RBM10P98175 930 aaKnown RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 ANKS3Q6ZW76 656 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 BAHD1Q8TBE0 780 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 ENOX1Q8TC92 643 aaKnown RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 MISP3Q96FF7 219 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 SLC9A7Q96T83 725 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 SEMA6BQ9H3T3 888 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 ANKRD62A6NC57 917 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 K7ELQ4 463 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 ZNF865P0CJ78 1059 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 ADMP35318 185 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 ETFBP38117 255 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 SLC7A5Q01650 507 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 PPP2R5EQ16537 467 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 CDH24Q86UP0 819 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 ZDHHC13Q8IUH4 622 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 XAGE3Q8WTP9 111 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 DPH2Q9BQC3 489 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 TRIT1Q9H3H1 467 aaKnown RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 ZNF214Q9UL59 606 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-210ENST00000534172 SPATA31D1Q6ZQQ2 1576 aa5.08□□□□□ -1.6
CSMD3-210ENST00000534172 CYP26A1O43174 497 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 DNAJA2O60884 412 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 UBOX5O94941 541 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 ANKRD39Q53RE8 183 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 FAM214BQ7L5A3 538 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 PMFBP1Q8TBY8 1022 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 ANTXR1Q9H6X2 564 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 RNF112Q9ULX5 631 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 HECW2Q9P2P5 1572 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 TMEM265A0A087WTH1 108 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 COBLO75128 1261 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 FOSL1P15407 271 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 CLCN7P51798 805 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 TCEAL1Q15170 157 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 IFI16Q16666 785 aaKnown RBP5.07□□□□□ -1.6
CSMD3-210ENST00000534172 ZNF662Q6ZS27 426 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 THAP5Q7Z6K1 395 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 STK11IPQ8N1F8 1099 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 SLC6A18Q96N87 628 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 EPN3Q9H201 632 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
CSMD3-210ENST00000534172 MRVI1Q9Y6F6 885 aa5.07□□□□□ -1.6
CSMD3-210ENST00000534172 FAM170BA6NMN3 283 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 FAM155AB1AL88 458 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-210ENST00000534172 LEFTY1O75610 366 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 FURINP09958 794 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 RAB33AQ14088 237 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 NFE2L2Q16236 605 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 NBPF12Q5TAG4 269 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-210ENST00000534172 ZNF765Q7L2R6 523 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 MFSD4AQ8N468 514 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 ZNF669Q96BR6 464 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-210ENST00000534172 GBP3Q9H0R5 595 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 A0A087WZG4 1122 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 KLF4O43474 513 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 ACRP10323 421 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 ENDOUP21128 410 aaKnown RBP5.06□□□□□ -1.6
CSMD3-210ENST00000534172 PRSS36Q5K4E3 855 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 NETO1Q8TDF5 533 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 PIF1Q9H611 641 aa5.06□□□□□ -1.6
CSMD3-210ENST00000534172 TLDC2A0PJX2 215 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 OXCT1P55809 520 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 GNPTABQ3T906 1256 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 CCDC144CPQ8IYA2 1237 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 VWCEQ96DN2 955 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 CCDC113Q9H0I3 377 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 PRR19A6NJB7 356 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 VHLLQ6RSH7 139 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 RUFY4Q6ZNE9 571 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 TMEM192Q8IY95 271 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 ANKRD13AQ8IZ07 590 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 GPR62Q9BZJ7 368 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 MKRN2Q9H000 416 aaKnown RBP5.05□□□□□ -1.6
CSMD3-210ENST00000534172 GPATCH2Q9NW75 528 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 VAV3Q9UKW4 847 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 PCDHB12Q9Y5F1 795 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 CAPN6Q9Y6Q1 641 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 ARAP1Q96P48 1450 aa5.05□□□□□ -1.6
CSMD3-210ENST00000534172 CEACAM5P06731 702 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 EEPD1Q7L9B9 569 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 FAM178BQ8IXR5 827 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 C7orf61Q8IZ16 206 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 CRACR2BQ8N4Y2 399 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-210ENST00000534172 FAM169BQ8N8A8 192 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 APBA2Q99767 749 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 TNKS2Q9H2K2 1166 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms