RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 COG2Q14746 738 aa21.85■■□□□ 1.09
UBXN1-216ENST00000533908 CLEC10AQ8IUN9 316 aa21.85■■□□□ 1.09
UBXN1-216ENST00000533908 COG6Q9Y2V7 657 aa21.85■■□□□ 1.09
UBXN1-216ENST00000533908 RLFQ13129 1914 aa21.84■■□□□ 1.09
UBXN1-216ENST00000533908 ZBED9Q6R2W3 1325 aa21.84■■□□□ 1.09
UBXN1-216ENST00000533908 IFIT2P09913 472 aaKnown RBP21.84■■□□□ 1.09
UBXN1-216ENST00000533908 ATP2B2Q01814 1243 aa21.84■■□□□ 1.09
UBXN1-216ENST00000533908 DDX20Q9UHI6 824 aaKnown RBP21.84■■□□□ 1.09
UBXN1-216ENST00000533908 CYP2D7A0A087X1C5 515 aa21.83■■□□□ 1.09
UBXN1-216ENST00000533908 CNGA1P29973 690 aa21.83■■□□□ 1.09
UBXN1-216ENST00000533908 LRIT3Q3SXY7 679 aa21.83■■□□□ 1.09
UBXN1-216ENST00000533908 Q7L0L9 218 aa21.83■■□□□ 1.09
UBXN1-216ENST00000533908 TDHQ8IZJ6 230 aa21.83■■□□□ 1.09
UBXN1-216ENST00000533908 UBE2OQ9C0C9 1292 aaKnown RBP21.83■■□□□ 1.09
UBXN1-216ENST00000533908 BOLA2Q9H3K6 86 aa21.83■■□□□ 1.09
UBXN1-216ENST00000533908 HOXC10Q9NYD6 342 aa21.83■■□□□ 1.09
UBXN1-216ENST00000533908 IVNS1ABPQ9Y6Y0 642 aa21.83■■□□□ 1.09
UBXN1-216ENST00000533908 FRMPD3Q5JV73 1810 aa21.83■■□□□ 1.08
UBXN1-216ENST00000533908 COBLO75128 1261 aa21.82■■□□□ 1.08
UBXN1-216ENST00000533908 AKR1B1P15121 316 aa21.82■■□□□ 1.08
UBXN1-216ENST00000533908 ADD2P35612 726 aa21.82■■□□□ 1.08
UBXN1-216ENST00000533908 TANGO6Q9C0B7 1094 aa21.82■■□□□ 1.08
UBXN1-216ENST00000533908 SENP6Q9GZR1 1112 aaPredicted RBP21.82■■□□□ 1.08
UBXN1-216ENST00000533908 SPATC1LQ9H0A9 340 aa21.82■■□□□ 1.08
UBXN1-216ENST00000533908 MBD4O95243 580 aa21.81■■□□□ 1.08
UBXN1-216ENST00000533908 CYBAP13498 195 aa21.81■■□□□ 1.08
UBXN1-216ENST00000533908 ATP5JP18859 108 aa21.81■■□□□ 1.08
UBXN1-216ENST00000533908 ERCC3P19447 782 aa21.81■■□□□ 1.08
UBXN1-216ENST00000533908 ADORA2AP29274 412 aa21.81■■□□□ 1.08
UBXN1-216ENST00000533908 MDM2Q00987 491 aaPredicted RBP21.81■■□□□ 1.08
UBXN1-216ENST00000533908 TMEM179Q6ZVK1 233 aa21.81■■□□□ 1.08
UBXN1-216ENST00000533908 LPAR1Q92633 364 aa21.81■■□□□ 1.08
UBXN1-216ENST00000533908 PAG1Q9NWQ8 432 aa21.81■■□□□ 1.08
UBXN1-216ENST00000533908 COL6A3P12111 3177 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 DSG3P32926 999 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 GPR153Q6NV75 609 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 DPP9Q86TI2 863 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 SPICE1Q8N0Z3 855 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 DEFB123Q8N688 67 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 SLC17A8Q8NDX2 589 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 SWAP70Q9UH65 585 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 TMX2Q9Y320 296 aa21.8■■□□□ 1.08
UBXN1-216ENST00000533908 STRNO43815 780 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 RAB11FIP3O75154 756 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 HMMRO75330 724 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 MS4A1P11836 297 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 ATN1P54259 1190 aaPredicted RBP21.79■■□□□ 1.08
UBXN1-216ENST00000533908 C12orf60Q5U649 245 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
UBXN1-216ENST00000533908 SHCBP1Q8NEM2 672 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 ATG4CQ96DT6 458 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 HAUS7Q99871 368 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 ATP8A2Q9NTI2 1148 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 DDX19BQ9UMR2 479 aa21.79■■□□□ 1.08
UBXN1-216ENST00000533908 A0A0G2JMZ2 1700 aa21.78■■□□□ 1.08
UBXN1-216ENST00000533908 USP17L12C9JPN9 530 aa21.78■■□□□ 1.08
UBXN1-216ENST00000533908 USP17L21D6R901 530 aa21.78■■□□□ 1.08
UBXN1-216ENST00000533908 CDK8P49336 464 aa21.78■■□□□ 1.08
UBXN1-216ENST00000533908 PRAMEF19Q5SWL8 479 aa21.78■■□□□ 1.08
UBXN1-216ENST00000533908 ANO1Q5XXA6 986 aa21.78■■□□□ 1.08
UBXN1-216ENST00000533908 OLFML2BQ68BL8 750 aa21.78■■□□□ 1.08
UBXN1-216ENST00000533908 BAZ2AQ9UIF9 1905 aaKnown RBP21.78■■□□□ 1.08
UBXN1-216ENST00000533908 DNAH12Q6ZR08 3092 aa21.77■■□□□ 1.08
UBXN1-216ENST00000533908 DNM1LO00429 736 aa21.77■■□□□ 1.08
UBXN1-216ENST00000533908 MSCO60682 206 aa21.77■■□□□ 1.08
UBXN1-216ENST00000533908 GJC2Q5T442 439 aaPredicted RBP21.77■■□□□ 1.08
UBXN1-216ENST00000533908 VCPKMTQ9H867 229 aa21.77■■□□□ 1.08
UBXN1-216ENST00000533908 MTMR10Q9NXD2 777 aa21.77■■□□□ 1.08
UBXN1-216ENST00000533908 FLOT1O75955 427 aa21.76■■□□□ 1.07
UBXN1-216ENST00000533908 ICA1Q05084 483 aa21.76■■□□□ 1.07
UBXN1-216ENST00000533908 PLS1Q14651 629 aa21.76■■□□□ 1.07
UBXN1-216ENST00000533908 ZNF236Q9UL36 1845 aa21.76■■□□□ 1.07
UBXN1-216ENST00000533908 SMARCA5O60264 1052 aaPredicted RBP21.75■■□□□ 1.07
UBXN1-216ENST00000533908 EEF2P13639 858 aaKnown RBP21.75■■□□□ 1.07
UBXN1-216ENST00000533908 TMEM132BQ14DG7 1078 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 C16orf86Q6ZW13 317 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 NCAPG2Q86XI2 1143 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 MB21D1Q8N884 522 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 CCDC17Q96LX7 622 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 PUS7LQ9H0K6 701 aaKnown RBP21.75■■□□□ 1.07
UBXN1-216ENST00000533908 MROH8Q9H579 483 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 ARHGEF10LQ9HCE6 1279 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 FBXO28Q9NVF7 368 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 ADAMTS5Q9UNA0 930 aa21.75■■□□□ 1.07
UBXN1-216ENST00000533908 RTP1P59025 263 aa21.74■■□□□ 1.07
UBXN1-216ENST00000533908 UBE3CQ15386 1083 aa21.74■■□□□ 1.07
UBXN1-216ENST00000533908 CTR9Q6PD62 1173 aa21.74■■□□□ 1.07
UBXN1-216ENST00000533908 SAMD1Q6SPF0 538 aaPredicted RBP21.74■■□□□ 1.07
UBXN1-216ENST00000533908 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.74■■□□□ 1.07
UBXN1-216ENST00000533908 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.74■■□□□ 1.07
UBXN1-216ENST00000533908 DLL1O00548 723 aa21.73■■□□□ 1.07
UBXN1-216ENST00000533908 C20orf194Q5TEA3 1177 aa21.73■■□□□ 1.07
UBXN1-216ENST00000533908 SLC39A5Q6ZMH5 540 aa21.73■■□□□ 1.07
UBXN1-216ENST00000533908 ABRAQ8N0Z2 381 aa21.73■■□□□ 1.07
UBXN1-216ENST00000533908 ARRDC4Q8NCT1 418 aa21.73■■□□□ 1.07
UBXN1-216ENST00000533908 MAML3Q96JK9 1138 aa21.73■■□□□ 1.07
UBXN1-216ENST00000533908 SLC4A4Q9Y6R1 1079 aa21.73■■□□□ 1.07
UBXN1-216ENST00000533908 PARP14Q460N5 1801 aa21.73■■□□□ 1.07
UBXN1-216ENST00000533908 MYH8P13535 1937 aa21.72■■□□□ 1.07
UBXN1-216ENST00000533908 WDR46O15213 610 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms