RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.13■□□□□ 0.01
SVIP-205ENST00000533774 CLTBP09497 229 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 PBX2P40425 430 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
SVIP-205ENST00000533774 MAP3K12Q12852 859 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 NAA16Q6N069 864 aaPredicted RBP15.13■□□□□ 0.01
SVIP-205ENST00000533774 DPP9Q86TI2 863 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 ASB2Q96Q27 587 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 FEZ1Q99689 392 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 PHF24Q9UPV7 400 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 TACC3Q9Y6A5 838 aa15.13■□□□□ 0.01
SVIP-205ENST00000533774 GRXCR1A8MXD5 290 aa15.12■□□□□ 0.01
SVIP-205ENST00000533774 GUCY1A2P33402 732 aa15.12■□□□□ 0.01
SVIP-205ENST00000533774 ADGRE1Q14246 886 aa15.12■□□□□ 0.01
SVIP-205ENST00000533774 TATDN1Q6P1N9 297 aa15.12■□□□□ 0.01
SVIP-205ENST00000533774 ATXN2LQ8WWM7 1075 aaKnown RBP15.12■□□□□ 0.01
SVIP-205ENST00000533774 TIFAQ96CG3 184 aa15.12■□□□□ 0.01
SVIP-205ENST00000533774 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
SVIP-205ENST00000533774 PRDM12Q9H4Q4 367 aa15.12■□□□□ 0.01
SVIP-205ENST00000533774 RPAP3Q9H6T3 665 aaPredicted RBP15.12■□□□□ 0.01
SVIP-205ENST00000533774 MYH8P13535 1937 aa15.11■□□□□ 0.01
SVIP-205ENST00000533774 MCM3APO60318 1980 aa15.11■□□□□ 0.01
SVIP-205ENST00000533774 BAG3O95817 575 aa15.11■□□□□ 0.01
SVIP-205ENST00000533774 RAG1P15918 1043 aa15.11■□□□□ 0.01
SVIP-205ENST00000533774 PLCG2P16885 1265 aa15.11■□□□□ 0.01
SVIP-205ENST00000533774 FPGSQ05932 587 aa15.11■□□□□ 0.01
SVIP-205ENST00000533774 RAB3GAP1Q15042 981 aa15.11■□□□□ 0.01
SVIP-205ENST00000533774 C16orf59Q7L2K0 433 aa15.11■□□□□ 0.01
SVIP-205ENST00000533774 NECAB3Q96P71 396 aaPredicted RBP15.11■□□□□ 0.01
SVIP-205ENST00000533774 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.11■□□□□ 0.01
SVIP-205ENST00000533774 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
SVIP-205ENST00000533774 SRGAP3O43295 1099 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 PQBP1O60828 265 aaKnown RBP15.1■□□□□ 0.01
SVIP-205ENST00000533774 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
SVIP-205ENST00000533774 ERCC3P19447 782 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 FAAP100Q0VG06 881 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 CCDC85BQ15834 202 aaPredicted RBP15.1■□□□□ 0.01
SVIP-205ENST00000533774 KIAA1755Q5JYT7 1200 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 GORABQ5T7V8 394 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 UHRF1Q96T88 793 aaPredicted RBP15.1■□□□□ 0.01
SVIP-205ENST00000533774 PBX4Q9BYU1 374 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 SPATC1LQ9H0A9 340 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 THEGQ9P2T0 379 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 NAV1Q8NEY1 1877 aa15.1■□□□□ 0.01
SVIP-205ENST00000533774 A0A1W2PQ45 241 aaPredicted RBP15.09■□□□□ 0.01
SVIP-205ENST00000533774 A0A1W2PQY0 241 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 STRNO43815 780 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 PGK1P00558 417 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 HLA-DOAP06340 250 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 TAL1P17542 331 aaPredicted RBP15.09■□□□□ 0.01
SVIP-205ENST00000533774 USP14P54578 494 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 AKNAD1Q5T1N1 836 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 LENG1Q96BZ8 264 aaPredicted RBP15.09■□□□□ 0.01
SVIP-205ENST00000533774 MAML3Q96JK9 1138 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 PIH1D3Q9NQM4 214 aaKnown RBP15.09■□□□□ 0.01
SVIP-205ENST00000533774 TMEM39AQ9NV64 488 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 XIRP2A4UGR9 3374 aa15.09■□□□□ 0.01
SVIP-205ENST00000533774 A0A1W2PRG0 241 aa15.08■□□□□ 0
SVIP-205ENST00000533774 SHMT1P34896 483 aa15.08■□□□□ 0
SVIP-205ENST00000533774 MRPS5P82675 430 aaKnown RBP15.08■□□□□ 0
SVIP-205ENST00000533774 EVX2Q03828 476 aa15.08■□□□□ 0
SVIP-205ENST00000533774 MTX1Q13505 466 aa15.08■□□□□ 0
SVIP-205ENST00000533774 ALDH1L2Q3SY69 923 aa15.08■□□□□ 0
SVIP-205ENST00000533774 RASIP1Q5U651 963 aa15.08■□□□□ 0
SVIP-205ENST00000533774 FAM9BQ8IZU0 186 aa15.08■□□□□ 0
SVIP-205ENST00000533774 GAS2L1Q99501 681 aaPredicted RBP15.08■□□□□ 0
SVIP-205ENST00000533774 XPNPEP3Q9NQH7 507 aa15.08■□□□□ 0
SVIP-205ENST00000533774 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0
SVIP-205ENST00000533774 NOB1Q9ULX3 412 aaKnown RBP15.08■□□□□ 0
SVIP-205ENST00000533774 PRRC2BQ5JSZ5 2229 aaKnown RBP15.07■□□□□ 0
SVIP-205ENST00000533774 UQCRFS1P1P0C7P4 283 aa15.07■□□□□ 0
SVIP-205ENST00000533774 SEPT2Q15019 361 aa15.07■□□□□ 0
SVIP-205ENST00000533774 ABCB5Q2M3G0 1257 aa15.07■□□□□ 0
SVIP-205ENST00000533774 CERKLQ49MI3 558 aaPredicted RBP15.07■□□□□ 0
SVIP-205ENST00000533774 TMEM240Q5SV17 173 aa15.07■□□□□ 0
SVIP-205ENST00000533774 SHCBP1Q8NEM2 672 aa15.07■□□□□ 0
SVIP-205ENST00000533774 TRANK1O15050 2925 aa15.06■□□□□ 0
SVIP-205ENST00000533774 COG2Q14746 738 aa15.06■□□□□ 0
SVIP-205ENST00000533774 ANKRD33Q7Z3H0 272 aa15.06■□□□□ 0
SVIP-205ENST00000533774 MIGA1Q8NAN2 632 aa15.06■□□□□ 0
SVIP-205ENST00000533774 SLC44A5Q8NCS7 719 aa15.06■□□□□ 0
SVIP-205ENST00000533774 DBNDD2Q9BQY9 259 aa15.06■□□□□ 0
SVIP-205ENST00000533774 EHD4Q9H223 541 aa15.06■□□□□ 0
SVIP-205ENST00000533774 SERPINB13Q9UIV8 391 aa15.06■□□□□ 0
SVIP-205ENST00000533774 TBX21Q9UL17 535 aa15.06■□□□□ 0
SVIP-205ENST00000533774 PNMA6EA0A0J9YXQ4 647 aa15.05■□□□□ -0
SVIP-205ENST00000533774 ADAMTS4O75173 837 aa15.05■□□□□ -0
SVIP-205ENST00000533774 TIMP1P01033 207 aa15.05■□□□□ -0
SVIP-205ENST00000533774 ZNF865P0CJ78 1059 aaPredicted RBP15.05■□□□□ -0
SVIP-205ENST00000533774 RARBP10826 455 aa15.05■□□□□ -0
SVIP-205ENST00000533774 ZAP70P43403 619 aa15.05■□□□□ -0
SVIP-205ENST00000533774 PLCD1P51178 756 aa15.05■□□□□ -0
SVIP-205ENST00000533774 IRX5P78411 483 aaPredicted RBP15.05■□□□□ -0
SVIP-205ENST00000533774 SLFN5Q08AF3 891 aa15.05■□□□□ -0
SVIP-205ENST00000533774 ATF7IPQ6VMQ6 1270 aa15.05■□□□□ -0
SVIP-205ENST00000533774 TOX2Q96NM4 488 aa15.05■□□□□ -0
SVIP-205ENST00000533774 BAZ2AQ9UIF9 1905 aaKnown RBP15.04■□□□□ -0
SVIP-205ENST00000533774 PGK2P07205 417 aa15.04■□□□□ -0
SVIP-205ENST00000533774 ACRP10323 421 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms