RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 TBC1D10CQ8IV04 446 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 MB21D2Q8IYB1 491 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 HERC5Q9UII4 1024 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 SERPINB13Q9UIV8 391 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 ANGEL1Q9UNK9 670 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 KIF3AQ9Y496 699 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 MYH1P12882 1939 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 CUL4AQ13619 759 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 RRP12Q5JTH9 1297 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 SYNE3Q6ZMZ3 975 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 NOL8Q76FK4 1167 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 AGXT2Q9BYV1 514 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 EHD4Q9H223 541 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 TAF6LQ9Y6J9 622 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 ROBO3Q96MS0 1386 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 LAMB1P07942 1786 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 NAV1Q8NEY1 1877 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 BAZ2AQ9UIF9 1905 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 B4E1Z4 1266 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 ORC4O43929 436 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 CPA1P15085 419 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 PLCD1P51178 756 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 CTDSPL2Q05D32 466 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 SLC4A8Q2Y0W8 1093 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 DLK2Q6UY11 383 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 BRF1Q92994 677 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 ZNF274Q96GC6 653 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 SLKQ9H2G2 1235 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 MKNK2Q9HBH9 465 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 CHMP5Q9NZZ3 219 aa12.81□□□□□ -0.36
CCDC90B-218ENST00000533761 KDM4AO75164 1064 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 FGRP09769 529 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 LIFRP42702 1097 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 NEDD4P46934 1319 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 FKBP1BP68106 108 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 MAP3K9P80192 1104 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 NUCB2P80303 420 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 MIGA2Q7L4E1 593 aa12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 METTL16Q86W50 562 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC90B-218ENST00000533761 PASKQ96RG2 1323 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 IFIT3O14879 490 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 RANBP6O60518 1105 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 CELF2O95319 508 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 CYP2D6P10635 497 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 RCAN1P53805 252 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 TMEM67Q5HYA8 995 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 NFXL1Q6ZNB6 911 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 C2orf69Q8N8R5 385 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 SMC3Q9UQE7 1217 aa12.79□□□□□ -0.36
CCDC90B-218ENST00000533761 CCDC69A6NI79 296 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 TSPY2A6NKD2 308 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 PDCP20941 246 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 IREB2P48200 963 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 EVCP57679 992 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 FMR1Q06787 632 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 WTAPQ15007 396 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 PPP2R5BQ15173 497 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 ARMC9Q7Z3E5 817 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 LLPHQ9BRT6 129 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 ZNF341Q9BYN7 854 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 GBA2Q9HCG7 927 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 ZSWIM5Q9P217 1185 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 NAP1L2Q9ULW6 460 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 DDX60LQ5H9U9 1706 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-218ENST00000533761 CCDC196A0A1B0GTZ2 297 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 CDKL5O76039 1030 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 GABPAQ06546 454 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 PRKG1Q13976 671 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 ME3Q16798 604 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 CST9Q5W186 159 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 C16orf86Q6ZW13 317 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 GTF3C6Q969F1 213 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 SLC12A7Q9Y666 1083 aa12.77□□□□□ -0.36
CCDC90B-218ENST00000533761 UNCXA6NJT0 531 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 SH2B2O14492 632 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 CPLX1O14810 134 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 PFKFB2O60825 505 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 TSPY3P0CV98 308 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 TSPY8P0CW00 308 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 CALM1P0DP23 149 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms