RNA–Protein interactions for RNA: ENST00000533738.6

NUCB2-216, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-216ENST00000533738 GTF3C2Q8WUA4 911 aaPredicted RBP14.19□□□□□ -0.14
NUCB2-216ENST00000533738 PAGR1Q9BTK6 254 aa14.19□□□□□ -0.14
NUCB2-216ENST00000533738 SH2D4AQ9H788 454 aa14.19□□□□□ -0.14
NUCB2-216ENST00000533738 KANSL2Q9H9L4 492 aa14.19□□□□□ -0.14
NUCB2-216ENST00000533738 TNRC18O15417 2968 aaPredicted RBP14.18□□□□□ -0.14
NUCB2-216ENST00000533738 IGKV6D-41A0A0C4DH26 115 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 SPDYE16A6NNV3 312 aaPredicted RBP14.18□□□□□ -0.14
NUCB2-216ENST00000533738 SDSP20132 328 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 GRK4P32298 578 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 FLT3LGP49771 235 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 ERVK-9P63128 1117 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 ERVK-24P63145 666 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 ATP2B2Q01814 1243 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 Q3C1V9 767 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 NBPF11Q86T75 865 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 SPICE1Q8N0Z3 855 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 COA7Q96BR5 231 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 VCPKMTQ9H867 229 aa14.18□□□□□ -0.14
NUCB2-216ENST00000533738 CCDC171Q6TFL3 1326 aa14.17□□□□□ -0.14
NUCB2-216ENST00000533738 MYCP01106 439 aaPredicted RBP14.17□□□□□ -0.14
NUCB2-216ENST00000533738 GSPT1P15170 499 aaKnown RBP14.17□□□□□ -0.14
NUCB2-216ENST00000533738 MLLT1Q03111 559 aaPredicted RBP14.17□□□□□ -0.14
NUCB2-216ENST00000533738 CTDSPL2Q05D32 466 aa14.17□□□□□ -0.14
NUCB2-216ENST00000533738 LBX2Q6XYB7 198 aa14.17□□□□□ -0.14
NUCB2-216ENST00000533738 LPAR1Q92633 364 aa14.17□□□□□ -0.14
NUCB2-216ENST00000533738 PORCNQ9H237 461 aa14.17□□□□□ -0.14
NUCB2-216ENST00000533738 ZNF287Q9HBT7 754 aa14.17□□□□□ -0.14
NUCB2-216ENST00000533738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.17□□□□□ -0.14
NUCB2-216ENST00000533738 TACC3Q9Y6A5 838 aa14.17□□□□□ -0.14
NUCB2-216ENST00000533738 PLIN4Q96Q06 1357 aa14.17□□□□□ -0.14
NUCB2-216ENST00000533738 ADCY3O60266 1144 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 SLC3A2P08195 630 aaKnown RBP14.16□□□□□ -0.14
NUCB2-216ENST00000533738 HSPD1P10809 573 aaKnown RBP14.16□□□□□ -0.14
NUCB2-216ENST00000533738 PDE4BQ07343 736 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 IRF5Q13568 498 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 ALX1Q15699 326 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 TTC22Q5TAA0 569 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 ZNF444Q8N0Y2 327 aaPredicted RBP14.16□□□□□ -0.14
NUCB2-216ENST00000533738 SLAIN1Q8ND83 568 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 BTBD7Q9P203 1132 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 GJD2Q9UKL4 321 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 RABGAP1Q9Y3P9 1069 aa14.16□□□□□ -0.14
NUCB2-216ENST00000533738 RBBP6Q7Z6E9 1792 aaKnown RBP14.15□□□□□ -0.14
NUCB2-216ENST00000533738 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
NUCB2-216ENST00000533738 FGAP02671 866 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 ELNP15502 786 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 MAPK4P31152 587 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 COG2Q14746 738 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 MTFR1Q15390 333 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 FAM47AQ5JRC9 791 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 CEP95Q96GE4 821 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 GOPCQ9HD26 462 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 INCENPQ9NQS7 918 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 DIAPH3Q9NSV4 1193 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 NYAP2Q9P242 653 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 ANAPC4Q9UJX5 808 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
NUCB2-216ENST00000533738 ZMYM6O95789 1325 aa14.15□□□□□ -0.15
NUCB2-216ENST00000533738 FLOT1O75955 427 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 TSPY3P0CV98 308 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 TSPY8P0CW00 308 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 DSG3P32926 999 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 TFAP4Q01664 338 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 CWC27Q6UX04 472 aaKnown RBP14.14□□□□□ -0.15
NUCB2-216ENST00000533738 GPR142Q7Z601 462 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 NEDD1Q8NHV4 660 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 PXYLP1Q8TE99 480 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 TMEM106CQ9BVX2 250 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 CLIP2Q9UDT6 1046 aa14.14□□□□□ -0.15
NUCB2-216ENST00000533738 MKI67P46013 3256 aaKnown RBP14.14□□□□□ -0.15
NUCB2-216ENST00000533738 RLFQ13129 1914 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 PLXNB2O15031 1838 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 HIP1O00291 1037 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 RAD21O60216 631 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 INHAP05111 366 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 EN2P19622 333 aaPredicted RBP14.13□□□□□ -0.15
NUCB2-216ENST00000533738 MFAP1P55081 439 aaKnown RBP14.13□□□□□ -0.15
NUCB2-216ENST00000533738 FAM83BQ5T0W9 1011 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 ATG4CQ96DT6 458 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 NUP88Q99567 741 aaPredicted RBP14.13□□□□□ -0.15
NUCB2-216ENST00000533738 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 HOXC10Q9NYD6 342 aa14.13□□□□□ -0.15
NUCB2-216ENST00000533738 BIN2Q9UBW5 565 aaPredicted RBP14.13□□□□□ -0.15
NUCB2-216ENST00000533738 F5H6K3 240 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 ORC4O43929 436 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 TTLL1O95922 423 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 NDUFB10O96000 172 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 FGRP09769 529 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 CCL5P13501 91 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 HAND2P61296 217 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 UBXN2AP68543 259 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 CCNA1P78396 465 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 KLRC3Q07444 240 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 MORN1Q5T089 497 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
NUCB2-216ENST00000533738 PLEKHH3Q7Z736 793 aa14.12□□□□□ -0.15
NUCB2-216ENST00000533738 CCAR1Q8IX12 1150 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms