RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 PERM1Q5SV97 790 aa7.87□□□□□ -1.15
SOX6-216ENST00000533658 TTLL7Q6ZT98 887 aa7.87□□□□□ -1.15
SOX6-216ENST00000533658 ANKMY2Q8IV38 441 aa7.87□□□□□ -1.15
SOX6-216ENST00000533658 POU5F2Q8N7G0 328 aa7.87□□□□□ -1.15
SOX6-216ENST00000533658 BRIP1Q9BX63 1249 aa7.87□□□□□ -1.15
SOX6-216ENST00000533658 GSX2Q9BZM3 304 aa7.87□□□□□ -1.15
SOX6-216ENST00000533658 TAOK3Q9H2K8 898 aa7.87□□□□□ -1.15
SOX6-216ENST00000533658 RRP7AQ9Y3A4 280 aaKnown RBP7.87□□□□□ -1.15
SOX6-216ENST00000533658 TCERG1O14776 1098 aaKnown RBP7.86□□□□□ -1.15
SOX6-216ENST00000533658 SNRPA1P09661 255 aaKnown RBP7.86□□□□□ -1.15
SOX6-216ENST00000533658 GLB1P16278 677 aa7.86□□□□□ -1.15
SOX6-216ENST00000533658 GPTP24298 496 aa7.86□□□□□ -1.15
SOX6-216ENST00000533658 CRTC2Q53ET0 693 aaPredicted RBP7.86□□□□□ -1.15
SOX6-216ENST00000533658 PRPF40BQ6NWY9 871 aaKnown RBP7.86□□□□□ -1.15
SOX6-216ENST00000533658 BTLAQ7Z6A9 289 aa7.86□□□□□ -1.15
SOX6-216ENST00000533658 LDHDQ86WU2 507 aa7.86□□□□□ -1.15
SOX6-216ENST00000533658 NBPF5PQ86XG9 351 aaPredicted RBP7.86□□□□□ -1.15
SOX6-216ENST00000533658 CCDC146Q8IYE0 955 aa7.86□□□□□ -1.15
SOX6-216ENST00000533658 STAG2Q8N3U4 1231 aa7.86□□□□□ -1.15
SOX6-216ENST00000533658 PLEKHF1Q96S99 279 aa7.86□□□□□ -1.15
SOX6-216ENST00000533658 NIP7Q9Y221 180 aaKnown RBP eCLIP7.86□□□□□ -1.15
SOX6-216ENST00000533658 FER1L6Q2WGJ9 1857 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 DKK1O94907 266 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 SRGNP10124 158 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 PDE6BP35913 854 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 LBX1P52954 281 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 TAF7Q15545 349 aaPredicted RBP7.85□□□□□ -1.15
SOX6-216ENST00000533658 KRT24Q2M2I5 525 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 FBLN7Q53RD9 439 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 ELMSAN1Q6PJG2 1045 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 ALDH16A1Q8IZ83 802 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 TTC9Q92623 222 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 TEX13AQ9BXU3 409 aaPredicted RBP7.85□□□□□ -1.15
SOX6-216ENST00000533658 TAF1DQ9H5J8 278 aaPredicted RBP7.85□□□□□ -1.15
SOX6-216ENST00000533658 ZNF277Q9NRM2 450 aaPredicted RBP7.85□□□□□ -1.15
SOX6-216ENST00000533658 SLX4Q8IY92 1834 aa7.85□□□□□ -1.15
SOX6-216ENST00000533658 ABCC12Q96J65 1359 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 ZNF541Q9H0D2 1346 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 IQCA1LA6NCM1 817 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 TMEM88BA6NKF7 163 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 KRTAP9-7A8MTY7 169 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 EIF4A1P60842 406 aaKnown RBP7.84□□□□□ -1.15
SOX6-216ENST00000533658 ST5P78524 1137 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 NFIAQ12857 509 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 DDX10Q13206 875 aaKnown RBP7.84□□□□□ -1.15
SOX6-216ENST00000533658 CCINQ13939 588 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 PROSER3Q2NL68 480 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 FAM200AQ8TCP9 573 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 VTI1AQ96AJ9 217 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 ABHD8Q96I13 439 aa7.84□□□□□ -1.15
SOX6-216ENST00000533658 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
SOX6-216ENST00000533658 UBN2Q6ZU65 1347 aa7.83□□□□□ -1.16
SOX6-216ENST00000533658 DHX15O43143 795 aaKnown RBP7.83□□□□□ -1.16
SOX6-216ENST00000533658 HSPA8P11142 646 aaKnown RBP7.83□□□□□ -1.16
SOX6-216ENST00000533658 EIF2S2P20042 333 aaKnown RBP7.83□□□□□ -1.16
SOX6-216ENST00000533658 EAPPQ56P03 285 aaPredicted RBP7.83□□□□□ -1.16
SOX6-216ENST00000533658 STYK1Q6J9G0 422 aa7.83□□□□□ -1.16
SOX6-216ENST00000533658 SYNE4Q8N205 404 aa7.83□□□□□ -1.16
SOX6-216ENST00000533658 MASTLQ96GX5 879 aa7.83□□□□□ -1.16
SOX6-216ENST00000533658 ADAMTSL1Q8N6G6 1762 aa7.83□□□□□ -1.16
SOX6-216ENST00000533658 DICER1Q9UPY3 1922 aaKnown RBP7.83□□□□□ -1.16
SOX6-216ENST00000533658 CACNA1SQ13698 1873 aa7.83□□□□□ -1.16
SOX6-216ENST00000533658 CCDC88AQ3V6T2 1871 aa7.83□□□□□ -1.16
SOX6-216ENST00000533658 BCORQ6W2J9 1755 aa7.82□□□□□ -1.16
SOX6-216ENST00000533658 PRR19A6NJB7 356 aa7.82□□□□□ -1.16
SOX6-216ENST00000533658 RASSF10A6NK89 507 aa7.82□□□□□ -1.16
SOX6-216ENST00000533658 IGFBP4P22692 258 aa7.82□□□□□ -1.16
SOX6-216ENST00000533658 SOGA3Q5TF21 947 aa7.82□□□□□ -1.16
SOX6-216ENST00000533658 SUSD4Q5VX71 490 aa7.82□□□□□ -1.16
SOX6-216ENST00000533658 AGGF1Q8N302 714 aaeCLIP7.82□□□□□ -1.16
SOX6-216ENST00000533658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.82□□□□□ -1.16
SOX6-216ENST00000533658 THSD7BQ9C0I4 1608 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 RNF123Q5XPI4 1314 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 HTATSF1O43719 755 aaKnown RBP7.81□□□□□ -1.16
SOX6-216ENST00000533658 MAP3K6O95382 1288 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 EPHX2P34913 555 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 RIPK4P57078 832 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 FMR1Q06787 632 aaKnown RBP eCLIP7.81□□□□□ -1.16
SOX6-216ENST00000533658 AIMP1Q12904 312 aaKnown RBP7.81□□□□□ -1.16
SOX6-216ENST00000533658 RTN1Q16799 776 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 CCDC93Q567U6 631 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 MAP1SQ66K74 1059 aaPredicted RBP7.81□□□□□ -1.16
SOX6-216ENST00000533658 TPTE2Q6XPS3 522 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 ABI1Q8IZP0 508 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 UBL7Q96S82 380 aaPredicted RBP7.81□□□□□ -1.16
SOX6-216ENST00000533658 TSPYL4Q9UJ04 414 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 HACL1Q9UJ83 578 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 ZNF652Q9Y2D9 606 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 LAS1LQ9Y4W2 734 aaKnown RBP7.81□□□□□ -1.16
SOX6-216ENST00000533658 ARFGEF2Q9Y6D5 1785 aa7.81□□□□□ -1.16
SOX6-216ENST00000533658 MAP3K15Q6ZN16 1313 aa7.8□□□□□ -1.16
SOX6-216ENST00000533658 MAPK8IP3Q9UPT6 1336 aa7.8□□□□□ -1.16
SOX6-216ENST00000533658 SCN4AP35499 1836 aa7.8□□□□□ -1.16
SOX6-216ENST00000533658 COL4A5P29400 1685 aa7.8□□□□□ -1.16
SOX6-216ENST00000533658 LGR5O75473 907 aa7.8□□□□□ -1.16
SOX6-216ENST00000533658 NPR1P16066 1061 aa7.8□□□□□ -1.16
SOX6-216ENST00000533658 MAP2K1Q02750 393 aaPredicted RBP7.8□□□□□ -1.16
SOX6-216ENST00000533658 FKBP4Q02790 459 aaKnown RBP eCLIP7.8□□□□□ -1.16
SOX6-216ENST00000533658 ZMYND15Q9H091 742 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms