RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 PHF24Q9UPV7 400 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 FAM47AQ5JRC9 791 aa9.57□□□□□ -0.88
NXF1-215ENST00000533440 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
NXF1-215ENST00000533440 AKNAD1Q5T1N1 836 aa9.57□□□□□ -0.88
NXF1-215ENST00000533440 EHD4Q9H223 541 aa9.57□□□□□ -0.88
NXF1-215ENST00000533440 RPAP3Q9H6T3 665 aaPredicted RBP9.57□□□□□ -0.88
NXF1-215ENST00000533440 SMC4Q9NTJ3 1288 aa9.57□□□□□ -0.88
NXF1-215ENST00000533440 SAP30BPQ9UHR5 308 aaKnown RBP9.57□□□□□ -0.88
NXF1-215ENST00000533440 BDP1A6H8Y1 2624 aa9.57□□□□□ -0.88
NXF1-215ENST00000533440 CHD9Q3L8U1 2897 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 ABCB7O75027 752 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 CYP2E1P05181 493 aaPredicted RBP9.56□□□□□ -0.88
NXF1-215ENST00000533440 RAG1P15918 1043 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 ERCC3P19447 782 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 DYNLL1P63167 89 aaKnown RBP9.56□□□□□ -0.88
NXF1-215ENST00000533440 FPGSQ05932 587 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 SLFN5Q08AF3 891 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 COG2Q14746 738 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 RAB3GAP1Q15042 981 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 CERKLQ49MI3 558 aaPredicted RBP9.56□□□□□ -0.88
NXF1-215ENST00000533440 ABRAQ8N0Z2 381 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 TIFAQ96CG3 184 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 FAM122AQ96E09 287 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 MAML3Q96JK9 1138 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 ASB2Q96Q27 587 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 SPATC1LQ9H0A9 340 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 SNRKQ9NRH2 765 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 SLC5A4Q9NY91 659 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 HOXC10Q9NYD6 342 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 NRBP1Q9UHY1 535 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 SERPINB13Q9UIV8 391 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 NOB1Q9ULX3 412 aaKnown RBP9.56□□□□□ -0.88
NXF1-215ENST00000533440 A0A0G2JMZ2 1700 aa9.56□□□□□ -0.88
NXF1-215ENST00000533440 SMCHD1A6NHR9 2005 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 MYH1P12882 1939 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 GNAI3P08754 354 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 GUCY1A2P33402 732 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 FAAP100Q0VG06 881 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 ABCB5Q2M3G0 1257 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 ANKRD33Q7Z3H0 272 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 FAM9BQ8IZU0 186 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 ADAMTS19Q8TE59 1207 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 TOX2Q96NM4 488 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 GAS2L1Q99501 681 aaPredicted RBP9.55□□□□□ -0.88
NXF1-215ENST00000533440 API5Q9BZZ5 524 aaKnown RBP9.55□□□□□ -0.88
NXF1-215ENST00000533440 MROH8Q9H579 483 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 XPNPEP3Q9NQH7 507 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 TMEM39AQ9NV64 488 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 THEGQ9P2T0 379 aa9.55□□□□□ -0.88
NXF1-215ENST00000533440 ROBO3Q96MS0 1386 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 MYO5AQ9Y4I1 1855 aaKnown RBP9.54□□□□□ -0.88
NXF1-215ENST00000533440 A0A1W2PQ45 241 aaPredicted RBP9.54□□□□□ -0.88
NXF1-215ENST00000533440 A0A1W2PQY0 241 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 A0A1W2PRG0 241 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 PQBP1O60828 265 aaKnown RBP9.54□□□□□ -0.88
NXF1-215ENST00000533440 RARBP10826 455 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 SHMT1P34896 483 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 MRPS5P82675 430 aaKnown RBP9.54□□□□□ -0.88
NXF1-215ENST00000533440 MAP3K12Q12852 859 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 RASIP1Q5U651 963 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 RNF180Q86T96 592 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 CERS3Q8IU89 383 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 MB21D1Q8N884 522 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 ZNF512BQ96KM6 892 aaPredicted RBP9.54□□□□□ -0.88
NXF1-215ENST00000533440 UHRF1Q96T88 793 aaPredicted RBP9.54□□□□□ -0.88
NXF1-215ENST00000533440 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.54□□□□□ -0.88
NXF1-215ENST00000533440 PBX4Q9BYU1 374 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 CABP5Q9NP86 173 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 GPR108Q9NPR9 543 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 CHD7Q9P2D1 2997 aa9.54□□□□□ -0.88
NXF1-215ENST00000533440 ANP32CO43423 234 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 ADAMTS4O75173 837 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 PGK1P00558 417 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 TIMP1P01033 207 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 CYP7A1P22680 504 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 PBX2P40425 430 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 ZAP70P43403 619 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 PLCD1P51178 756 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 GABPAQ06546 454 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 G3BP1Q13283 466 aaKnown RBP eCLIP9.53□□□□□ -0.88
NXF1-215ENST00000533440 ADGRE1Q14246 886 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 SEPT2Q15019 361 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 TTC39AQ5SRH9 613 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 TMEM240Q5SV17 173 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 C16orf59Q7L2K0 433 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 TTC6Q86TZ1 520 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 SLC44A5Q8NCS7 719 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 PPM1EQ8WY54 764 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 DBNDD2Q9BQY9 259 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 TSEN34Q9BSV6 310 aaKnown RBP9.53□□□□□ -0.88
NXF1-215ENST00000533440 PRDM12Q9H4Q4 367 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 PIH1D3Q9NQM4 214 aaKnown RBP9.53□□□□□ -0.88
NXF1-215ENST00000533440 TBX21Q9UL17 535 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 MYO9BQ13459 2157 aa9.53□□□□□ -0.88
NXF1-215ENST00000533440 PNMA6EA0A0J9YXQ4 647 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 GRXCR1A8MXD5 290 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 DCDC2CA8MYV0 355 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 CT47B1P0C2W7 299 aaPredicted RBP9.52□□□□□ -0.89
NXF1-215ENST00000533440 ZNF865P0CJ78 1059 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms