RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 TFRCP02786 760 aaKnown RBP13.6□□□□□ -0.23
CLCF1-202ENST00000533438 AKR1B1P15121 316 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 BMP8BP34820 402 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 CDK8P49336 464 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 TSHZ3Q63HK5 1081 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 CTR9Q6PD62 1173 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 PLEKHH3Q7Z736 793 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 CCDC17Q96LX7 622 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 HMX1Q9NP08 348 aaPredicted RBP13.6□□□□□ -0.23
CLCF1-202ENST00000533438 BTBD7Q9P203 1132 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 COL11A1P12107 1806 aaPredicted RBP13.6□□□□□ -0.23
CLCF1-202ENST00000533438 CCNA1P78396 465 aa13.59□□□□□ -0.23
CLCF1-202ENST00000533438 CLEC10AQ8IUN9 316 aa13.59□□□□□ -0.23
CLCF1-202ENST00000533438 AMOTL1Q8IY63 956 aa13.59□□□□□ -0.23
CLCF1-202ENST00000533438 TRMT44Q8IYL2 757 aaKnown RBP13.59□□□□□ -0.23
CLCF1-202ENST00000533438 OSBP2Q969R2 916 aa13.59□□□□□ -0.23
CLCF1-202ENST00000533438 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
CLCF1-202ENST00000533438 STRBPQ96SI9 672 aaKnown RBP13.59□□□□□ -0.23
CLCF1-202ENST00000533438 TMX2Q9Y320 296 aa13.59□□□□□ -0.23
CLCF1-202ENST00000533438 GSG1L2A8MUP6 293 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 RGS2P41220 211 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 IRX6P78412 446 aaPredicted RBP13.58□□□□□ -0.24
CLCF1-202ENST00000533438 ICA1Q05084 483 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 MAP2K5Q13163 448 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 COG2Q14746 738 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 CCL14Q16627 93 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 SBK1Q52WX2 424 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 CCAR1Q8IX12 1150 aaKnown RBP13.58□□□□□ -0.24
CLCF1-202ENST00000533438 ANKLE1Q8NAG6 615 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 APPBP2Q92624 585 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 LPAR1Q92633 364 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 DDRGK1Q96HY6 314 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 APBA2Q99767 749 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 GDF15Q99988 308 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 VCPKMTQ9H867 229 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 ARHGEF10LQ9HCE6 1279 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 ARPP21Q9UBL0 812 aaPredicted RBP13.58□□□□□ -0.24
CLCF1-202ENST00000533438 TTC41PQ6P2S7 1318 aa13.58□□□□□ -0.24
CLCF1-202ENST00000533438 RNF113AO15541 343 aaKnown RBP13.57□□□□□ -0.24
CLCF1-202ENST00000533438 ZFYP08048 801 aaPredicted RBP13.57□□□□□ -0.24
CLCF1-202ENST00000533438 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
CLCF1-202ENST00000533438 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
CLCF1-202ENST00000533438 PTPREP23469 700 aa13.57□□□□□ -0.24
CLCF1-202ENST00000533438 MNX1P50219 401 aaPredicted RBP13.57□□□□□ -0.24
CLCF1-202ENST00000533438 CACNB2Q08289 660 aaPredicted RBP13.57□□□□□ -0.24
CLCF1-202ENST00000533438 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
CLCF1-202ENST00000533438 GIMAP6Q6P9H5 292 aa13.57□□□□□ -0.24
CLCF1-202ENST00000533438 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
CLCF1-202ENST00000533438 DIS3LQ8TF46 1054 aaKnown RBP13.57□□□□□ -0.24
CLCF1-202ENST00000533438 PAWRQ96IZ0 340 aaKnown RBP13.57□□□□□ -0.24
CLCF1-202ENST00000533438 CRBNQ96SW2 442 aa13.57□□□□□ -0.24
CLCF1-202ENST00000533438 HOXC10Q9NYD6 342 aa13.57□□□□□ -0.24
CLCF1-202ENST00000533438 ROBO3Q96MS0 1386 aa13.57□□□□□ -0.24
CLCF1-202ENST00000533438 MYH4Q9Y623 1939 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 SLC15A5A6NIM6 579 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 EVI5O60447 810 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 GLRX3O76003 335 aaKnown RBP13.56□□□□□ -0.24
CLCF1-202ENST00000533438 HOXC6P09630 235 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 GRB14Q14449 540 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 TANGO6Q9C0B7 1094 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 SH2D4AQ9H788 454 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 EPB41L4AQ9HCS5 686 aaPredicted RBP13.56□□□□□ -0.24
CLCF1-202ENST00000533438 OGDHLQ9ULD0 1010 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
CLCF1-202ENST00000533438 ZNFX1Q9P2E3 1918 aaKnown RBP13.56□□□□□ -0.24
CLCF1-202ENST00000533438 SOX1O00570 391 aaPredicted RBP13.55□□□□□ -0.24
CLCF1-202ENST00000533438 WDR46O15213 610 aaKnown RBP13.55□□□□□ -0.24
CLCF1-202ENST00000533438 GPAA1O43292 621 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 IGHA2P01877 340 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 EEF2P13639 858 aaKnown RBP13.55□□□□□ -0.24
CLCF1-202ENST00000533438 DSG3P32926 999 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 NECAB2Q7Z6G3 386 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 SPICE1Q8N0Z3 855 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 MB21D1Q8N884 522 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 SLC17A8Q8NDX2 589 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 EXOC6Q8TAG9 804 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 OTUD7AQ8TE49 926 aaPredicted RBP13.55□□□□□ -0.24
CLCF1-202ENST00000533438 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLCF1-202ENST00000533438 MOV10L1Q9BXT6 1211 aaKnown RBP13.55□□□□□ -0.24
CLCF1-202ENST00000533438 SPATC1LQ9H0A9 340 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 KANSL2Q9H9L4 492 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 CWC22Q9HCG8 908 aaKnown RBP13.55□□□□□ -0.24
CLCF1-202ENST00000533438 FLRT1Q9NZU1 646 aa13.55□□□□□ -0.24
CLCF1-202ENST00000533438 M0R2C6 588 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 DLL1O00548 723 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 ERC2O15083 957 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 GNAT2P19087 354 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 RASA1P20936 1047 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
CLCF1-202ENST00000533438 AAMPQ13685 434 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 LRIT3Q3SXY7 679 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 WDR78Q5VTH9 848 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 LHX8Q68G74 356 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 SHCBP1Q8NEM2 672 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 NPLOC4Q8TAT6 608 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 ATG4CQ96DT6 458 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 IVNS1ABPQ9Y6Y0 642 aa13.54□□□□□ -0.24
CLCF1-202ENST00000533438 STRNO43815 780 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms