RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 ZNF589Q86UQ0 364 aaPredicted RBP14.56□□□□□ -0.08
SF3B2-213ENST00000533421 SLC44A5Q8NCS7 719 aa14.56□□□□□ -0.08
SF3B2-213ENST00000533421 SH3TC2Q8TF17 1288 aa14.56□□□□□ -0.08
SF3B2-213ENST00000533421 IL25Q9H293 177 aa14.56□□□□□ -0.08
SF3B2-213ENST00000533421 RPAP3Q9H6T3 665 aaPredicted RBP14.56□□□□□ -0.08
SF3B2-213ENST00000533421 GOPCQ9HD26 462 aa14.56□□□□□ -0.08
SF3B2-213ENST00000533421 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
SF3B2-213ENST00000533421 ROBO3Q96MS0 1386 aa14.56□□□□□ -0.08
SF3B2-213ENST00000533421 AKR1B1P15121 316 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 MFAP1P55081 439 aaKnown RBP14.55□□□□□ -0.08
SF3B2-213ENST00000533421 ERVK-9P63128 1117 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 ERVK-24P63145 666 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 VPS53Q5VIR6 699 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 CWC27Q6UX04 472 aaKnown RBP14.55□□□□□ -0.08
SF3B2-213ENST00000533421 LBX2Q6XYB7 198 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 TRMT44Q8IYL2 757 aaKnown RBP14.55□□□□□ -0.08
SF3B2-213ENST00000533421 IFNL3Q8IZI9 196 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 ZNF444Q8N0Y2 327 aaPredicted RBP14.55□□□□□ -0.08
SF3B2-213ENST00000533421 ACER1Q8TDN7 264 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 PAGR1Q9BTK6 254 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 TANGO6Q9C0B7 1094 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 EPB41L4AQ9HCS5 686 aaPredicted RBP14.55□□□□□ -0.08
SF3B2-213ENST00000533421 HELLSQ9NRZ9 838 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 TMX2Q9Y320 296 aa14.55□□□□□ -0.08
SF3B2-213ENST00000533421 WDR46O15213 610 aaKnown RBP14.54□□□□□ -0.08
SF3B2-213ENST00000533421 ATP2B2Q01814 1243 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 COG2Q14746 738 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 MB21D1Q8N884 522 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 NUDT12Q9BQG2 462 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 VCPKMTQ9H867 229 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 DIAPH3Q9NSV4 1193 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 GABRQQ9UN88 632 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 IVNS1ABPQ9Y6Y0 642 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 HTTP42858 3142 aa14.54□□□□□ -0.08
SF3B2-213ENST00000533421 POTEFA5A3E0 1075 aa14.53□□□□□ -0.08
SF3B2-213ENST00000533421 HIP1O00291 1037 aa14.53□□□□□ -0.08
SF3B2-213ENST00000533421 FOXP2O15409 715 aa14.53□□□□□ -0.08
SF3B2-213ENST00000533421 RBPJLQ9UBG7 517 aa14.53□□□□□ -0.08
SF3B2-213ENST00000533421 HMGCRP04035 888 aa14.52□□□□□ -0.09
SF3B2-213ENST00000533421 EEF2P13639 858 aaKnown RBP14.52□□□□□ -0.09
SF3B2-213ENST00000533421 MCMDC2Q4G0Z9 681 aa14.52□□□□□ -0.09
SF3B2-213ENST00000533421 PLEKHH3Q7Z736 793 aa14.52□□□□□ -0.09
SF3B2-213ENST00000533421 RNF208Q9H0X6 261 aa14.52□□□□□ -0.09
SF3B2-213ENST00000533421 SYNPO2Q9UMS6 1093 aa14.52□□□□□ -0.09
SF3B2-213ENST00000533421 A0A1W2PRG0 241 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 SPDYE16A6NNV3 312 aaPredicted RBP14.51□□□□□ -0.09
SF3B2-213ENST00000533421 RAD21O60216 631 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 FLOT1O75955 427 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 MYCP01106 439 aaPredicted RBP14.51□□□□□ -0.09
SF3B2-213ENST00000533421 INHAP05111 366 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 GJB1P08034 283 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 TSPY3P0CV98 308 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 TSPY8P0CW00 308 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 XRCC5P13010 732 aaKnown RBP14.51□□□□□ -0.09
SF3B2-213ENST00000533421 CCL5P13501 91 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 RASA1P20936 1047 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 RGS2P41220 211 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 PPARAQ07869 468 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 WDR78Q5VTH9 848 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 TXNRD2Q9NNW7 524 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 NYAP2Q9P242 653 aa14.51□□□□□ -0.09
SF3B2-213ENST00000533421 CCDC171Q6TFL3 1326 aa14.5□□□□□ -0.09
SF3B2-213ENST00000533421 EN2P19622 333 aaPredicted RBP14.5□□□□□ -0.09
SF3B2-213ENST00000533421 CHMLP26374 656 aa14.5□□□□□ -0.09
SF3B2-213ENST00000533421 GPR142Q7Z601 462 aa14.5□□□□□ -0.09
SF3B2-213ENST00000533421 SLC5A4Q9NY91 659 aa14.5□□□□□ -0.09
SF3B2-213ENST00000533421 GTF3C3Q9Y5Q9 886 aa14.5□□□□□ -0.09
SF3B2-213ENST00000533421 KIAA0100Q14667 2235 aaKnown RBP14.49□□□□□ -0.09
SF3B2-213ENST00000533421 STRNO43815 780 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 TTLL1O95922 423 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 ELNP15502 786 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 ZKSCAN1P17029 563 aaPredicted RBP14.49□□□□□ -0.09
SF3B2-213ENST00000533421 DSG3P32926 999 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 COPB2P35606 906 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 GJA8P48165 433 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 MTFR1Q15390 333 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 ALX1Q15699 326 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 SPICE1Q8N0Z3 855 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 SHCBP1Q8NEM2 672 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 APBA2Q99767 749 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 GJD2Q9UKL4 321 aa14.49□□□□□ -0.09
SF3B2-213ENST00000533421 PLIN4Q96Q06 1357 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 ZMYM6O95789 1325 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 SLC15A5A6NIM6 579 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 PCP11498 1178 aaKnown RBP14.48□□□□□ -0.09
SF3B2-213ENST00000533421 Q3C1V9 767 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 BMP2KLQ5H9B9 411 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 CLEC10AQ8IUN9 316 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 PORCNQ9H237 461 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 MROH8Q9H579 483 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 HMX1Q9NP08 348 aaPredicted RBP14.48□□□□□ -0.09
SF3B2-213ENST00000533421 INCENPQ9NQS7 918 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 CTDP1Q9Y5B0 961 aaPredicted RBP14.48□□□□□ -0.09
SF3B2-213ENST00000533421 GREB1LQ9C091 1923 aaPredicted RBP14.48□□□□□ -0.09
SF3B2-213ENST00000533421 DOCK3Q8IZD9 2030 aa14.48□□□□□ -0.09
SF3B2-213ENST00000533421 RPTORQ8N122 1335 aa14.47□□□□□ -0.09
SF3B2-213ENST00000533421 TSPY2A6NKD2 308 aa14.47□□□□□ -0.09
SF3B2-213ENST00000533421 SLC25A27O95847 323 aa14.47□□□□□ -0.09
SF3B2-213ENST00000533421 HSPD1P10809 573 aaKnown RBP14.47□□□□□ -0.09
SF3B2-213ENST00000533421 CYP2B6P20813 491 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms