RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 FAM160A1Q05DH4 1040 aa25.15■■□□□ 1.62
AP004608.1-202ENST00000533390 NR5A1Q13285 461 aa25.15■■□□□ 1.62
AP004608.1-202ENST00000533390 ZSCAN29Q8IWY8 852 aaPredicted RBP25.15■■□□□ 1.62
AP004608.1-202ENST00000533390 MTMR4Q9NYA4 1195 aa25.15■■□□□ 1.62
AP004608.1-202ENST00000533390 FAM198AQ9UFP1 575 aa25.15■■□□□ 1.62
AP004608.1-202ENST00000533390 BRCA1P38398 1863 aaKnown RBP25.15■■□□□ 1.62
AP004608.1-202ENST00000533390 PALM3A6NDB9 673 aaPredicted RBP25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 PSMD14O00487 310 aa25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 VIL1P09327 827 aaKnown RBP25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 PARP1P09874 1014 aaKnown RBP25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 SHMT1P34896 483 aa25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 OXER1Q8TDS5 423 aa25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 PIBF1Q8WXW3 757 aa25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 TRIM34Q9BYJ4 488 aa25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 GOLPH3LQ9H4A5 285 aa25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 TDRD3Q9H7E2 651 aaKnown RBP25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 PI4KBQ9UBF8 816 aa25.14■■□□□ 1.61
AP004608.1-202ENST00000533390 CCDC192P0DO97 292 aa25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 R3HDM1Q15032 1099 aaKnown RBP25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 ZFPM1Q8IX07 1006 aa25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 CCDC17Q96LX7 622 aa25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 PPP1R1BQ9UD71 204 aaPredicted RBP25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 SIPA1L1O43166 1804 aa25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 KINO60870 393 aaKnown RBP25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 PTPAQ15257 358 aa25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 PPP4R3BQ5MIZ7 849 aa25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 SHISA4Q96DD7 197 aa25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 ZNRF3Q9ULT6 936 aa25.13■■□□□ 1.61
AP004608.1-202ENST00000533390 COL4A5P29400 1685 aa25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 MARCKSP29966 332 aaPredicted RBP25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 NLRP5P59047 1200 aa25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 OGFOD1Q8N543 542 aa25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 RNF214Q8ND24 703 aa25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 FUCA2Q9BTY2 467 aa25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 SH3GLB2Q9NR46 395 aa25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 TMOD2Q9NZR1 351 aa25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 FER1L6Q2WGJ9 1857 aa25.12■■□□□ 1.61
AP004608.1-202ENST00000533390 GREB1LQ9C091 1923 aaPredicted RBP25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 IGKV6D-41A0A0C4DH26 115 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 KLRF2D3W0D1 207 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 MPHOSPH10O00566 681 aaKnown RBP25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 CTAGE5O15320 804 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 ENTPD3O75355 529 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 TTLL1O95922 423 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 PRMT6Q96LA8 375 aaPredicted RBP25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 CABP5Q9NP86 173 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 CEP131Q9UPN4 1083 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 DDTLA6NHG4 134 aaPredicted RBP25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 SNW1Q13573 536 aaKnown RBP25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 RBM43Q6ZSC3 357 aaKnown RBP25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 ENGASEQ8NFI3 743 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 SPZ1Q9BXG8 430 aa25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.11■■□□□ 1.61
AP004608.1-202ENST00000533390 MYH4Q9Y623 1939 aa25.1■■□□□ 1.61
AP004608.1-202ENST00000533390 GOLGA8HP0CJ92 632 aa25.1■■□□□ 1.61
AP004608.1-202ENST00000533390 CALML3P27482 149 aa25.1■■□□□ 1.61
AP004608.1-202ENST00000533390 TOB1P50616 345 aaPredicted RBP25.1■■□□□ 1.61
AP004608.1-202ENST00000533390 FOXP4Q8IVH2 680 aaPredicted RBP25.1■■□□□ 1.61
AP004608.1-202ENST00000533390 CKAP2LQ8IYA6 745 aa25.1■■□□□ 1.61
AP004608.1-202ENST00000533390 TAOK3Q9H2K8 898 aa25.1■■□□□ 1.61
AP004608.1-202ENST00000533390 NOL7Q9UMY1 257 aaKnown RBP25.1■■□□□ 1.61
AP004608.1-202ENST00000533390 A0A1B0GVL5 298 aa25.09■■□□□ 1.61
AP004608.1-202ENST00000533390 AXDND1Q5T1B0 1012 aaPredicted RBP25.09■■□□□ 1.61
AP004608.1-202ENST00000533390 GMLQ99445 158 aa25.09■■□□□ 1.61
AP004608.1-202ENST00000533390 CMA1P23946 247 aa25.09■■□□□ 1.61
AP004608.1-202ENST00000533390 SMARCA1P28370 1054 aa25.09■■□□□ 1.61
AP004608.1-202ENST00000533390 DLGAP5Q15398 846 aa25.09■■□□□ 1.61
AP004608.1-202ENST00000533390 USP17L2Q6R6M4 530 aa25.09■■□□□ 1.61
AP004608.1-202ENST00000533390 CLIP2Q9UDT6 1046 aa25.09■■□□□ 1.61
AP004608.1-202ENST00000533390 COL2A1P02458 1487 aaPredicted RBP25.08■■□□□ 1.61
AP004608.1-202ENST00000533390 CYTH3O43739 400 aa25.08■■□□□ 1.61
AP004608.1-202ENST00000533390 EIF6P56537 245 aaKnown RBP25.08■■□□□ 1.61
AP004608.1-202ENST00000533390 AGBL3Q8NEM8 1001 aa25.08■■□□□ 1.61
AP004608.1-202ENST00000533390 CCDC148Q8NFR7 591 aa25.08■■□□□ 1.61
AP004608.1-202ENST00000533390 SPDYE2BA6NHP3 402 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 CUTAO60888 179 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 SPDYE6P0CI01 402 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 CERKLQ49MI3 558 aaPredicted RBP25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 SASS6Q6UVJ0 657 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 SH3BP5LQ7L8J4 393 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 FMR1NBQ8N0W7 255 aaPredicted RBP25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 LRRC47Q8N1G4 583 aaKnown RBP25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 JDP2Q8WYK2 163 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 DNAJC18Q9H819 358 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 CD2APQ9Y5K6 639 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 ATRNL1Q5VV63 1379 aa25.07■■□□□ 1.6
AP004608.1-202ENST00000533390 PDHBP11177 359 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 NDUFA8P51970 172 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 CCDC173Q0VFZ6 552 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 NPY5RQ15761 445 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 ASPRV1Q53RT3 343 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 GPKOWQ92917 476 aaPredicted RBP eCLIP25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 ZBTB12Q9Y330 459 aaPredicted RBP25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 USP17L5A8MUK1 530 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 ATP2B1P20020 1258 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 UVSSAQ2YD98 709 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 RASGRP2Q7LDG7 609 aa25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 FAM177A1Q8N128 213 aaPredicted RBP25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 KRI1Q8N9T8 703 aaKnown RBP25.06■■□□□ 1.6
AP004608.1-202ENST00000533390 RRP36Q96EU6 259 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms