RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ORC4O43929 436 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 FGAP02671 866 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 IRX3P78415 501 aaPredicted RBP11.72□□□□□ -0.53
NUP98-220ENST00000533346 ICA1Q05084 483 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 NMIQ13287 307 aaPredicted RBP11.72□□□□□ -0.53
NUP98-220ENST00000533346 VPS53Q5VIR6 699 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 POTEEQ6S8J3 1075 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 CCDC129Q6ZRS4 1044 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 ZNF444Q8N0Y2 327 aaPredicted RBP11.72□□□□□ -0.53
NUP98-220ENST00000533346 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 PXYLP1Q8TE99 480 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 RILPL2Q969X0 211 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 FEZ1Q99689 392 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 MKNK2Q9HBH9 465 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 HOXC10Q9NYD6 342 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 ADAMTS5Q9UNA0 930 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 RABGAP1Q9Y3P9 1069 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 WDR46O15213 610 aaKnown RBP11.71□□□□□ -0.53
NUP98-220ENST00000533346 EEF2P13639 858 aaKnown RBP11.71□□□□□ -0.53
NUP98-220ENST00000533346 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
NUP98-220ENST00000533346 CAPN2P17655 700 aa11.71□□□□□ -0.53
NUP98-220ENST00000533346 COG2Q14746 738 aa11.71□□□□□ -0.53
NUP98-220ENST00000533346 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
NUP98-220ENST00000533346 CENPQQ7L2Z9 268 aaPredicted RBP11.71□□□□□ -0.53
NUP98-220ENST00000533346 NBPF11Q86T75 865 aa11.71□□□□□ -0.53
NUP98-220ENST00000533346 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.53
NUP98-220ENST00000533346 GPRC5AQ8NFJ5 357 aa11.71□□□□□ -0.53
NUP98-220ENST00000533346 DSCC1Q9BVC3 393 aa11.71□□□□□ -0.53
NUP98-220ENST00000533346 RAD50Q92878 1312 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 FMNL1O95466 1100 aaPredicted RBP11.7□□□□□ -0.54
NUP98-220ENST00000533346 ERVK-9P63128 1117 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 ERVK-24P63145 666 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 KIAA1755Q5JYT7 1200 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 MB21D1Q8N884 522 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 RPAP3Q9H6T3 665 aaPredicted RBP11.7□□□□□ -0.54
NUP98-220ENST00000533346 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 TCP11L1Q9NUJ3 509 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 MTMR4Q9NYA4 1195 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 GJD2Q9UKL4 321 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 PTCH2Q9Y6C5 1203 aa11.7□□□□□ -0.54
NUP98-220ENST00000533346 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
NUP98-220ENST00000533346 CNMDO75829 334 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 MAPK4P31152 587 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 DSG3P32926 999 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 Q3C1V9 767 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 GMCL1P1Q8NEA9 526 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 COA7Q96BR5 231 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 GOPCQ9HD26 462 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 DIAPH3Q9NSV4 1193 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 COL11A1P12107 1806 aaPredicted RBP11.69□□□□□ -0.54
NUP98-220ENST00000533346 ZNF236Q9UL36 1845 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 HTTP42858 3142 aa11.69□□□□□ -0.54
NUP98-220ENST00000533346 TNPO2O14787 897 aaKnown RBP11.68□□□□□ -0.54
NUP98-220ENST00000533346 TTLL1O95922 423 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
NUP98-220ENST00000533346 CCNA1P78396 465 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 PRKCZQ05513 592 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 ZYXQ15942 572 aaKnown RBP11.68□□□□□ -0.54
NUP98-220ENST00000533346 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 CWC27Q6UX04 472 aaKnown RBP11.68□□□□□ -0.54
NUP98-220ENST00000533346 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 SHCBP1Q8NEM2 672 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 STAG1Q8WVM7 1258 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 USP6NLQ92738 828 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 CEP95Q96GE4 821 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
NUP98-220ENST00000533346 ZNFX1Q9P2E3 1918 aaKnown RBP11.67□□□□□ -0.54
NUP98-220ENST00000533346 F5H6K3 240 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 PLA2G6O60733 806 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 TSPY3P0CV98 308 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 TSPY8P0CW00 308 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 CHMLP26374 656 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 GRK4P32298 578 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 FLT3LGP49771 235 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 TFAP4Q01664 338 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 KLRC3Q07444 240 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 SLC9C1Q4G0N8 1177 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 CLEC10AQ8IUN9 316 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 RUFY2Q8WXA3 655 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 SOCS4Q8WXH5 440 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 TTC14Q96N46 770 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 IL17RBQ9NRM6 502 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 GABRQQ9UN88 632 aa11.67□□□□□ -0.54
NUP98-220ENST00000533346 ZNF213O14771 459 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 ATP2A1O14983 1001 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 STRNO43815 780 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 PRDM1O75626 825 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 FDX1P10109 184 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 CTDSPL2Q05D32 466 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 MORN1Q5T089 497 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 AKNAD1Q5T1N1 836 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
NUP98-220ENST00000533346 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
NUP98-220ENST00000533346 RAET1EQ8TD07 263 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 GMCL1Q96IK5 515 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 NBPF3Q9H094 633 aa11.66□□□□□ -0.54
NUP98-220ENST00000533346 RNF41Q9H4P4 317 aaPredicted RBP11.66□□□□□ -0.54
NUP98-220ENST00000533346 CLIP2Q9UDT6 1046 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms