RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 NBPF10Q6P3W6 841 aaKnown RBP13.68□□□□□ -0.22
BDNF-218ENST00000533246 NBPF15Q8N660 670 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 EYA3Q99504 573 aa13.68□□□□□ -0.22
BDNF-218ENST00000533246 RNF17Q9BXT8 1623 aaKnown RBP13.67□□□□□ -0.22
BDNF-218ENST00000533246 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 TECP42680 631 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 SLC39A14Q15043 492 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 KIAA0825Q8IV33 1275 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 RNF217Q8TC41 542 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 GPR101Q96P66 508 aaPredicted RBP13.67□□□□□ -0.22
BDNF-218ENST00000533246 RTEL1Q9NZ71 1219 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 TET3O43151 1660 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 KIF23Q02241 960 aaPredicted RBP13.67□□□□□ -0.22
BDNF-218ENST00000533246 RESTQ13127 1097 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 EGFL6Q8IUX8 553 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 CEP112Q8N8E3 955 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 PGBD1Q96JS3 809 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
BDNF-218ENST00000533246 FAM13AO94988 1023 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 MCM3P25205 808 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 DIXDC1Q155Q3 683 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 CCDC174Q6PII3 467 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 CSRNP2Q9H175 543 aa13.67□□□□□ -0.22
BDNF-218ENST00000533246 SRP68Q9UHB9 627 aaKnown RBP13.67□□□□□ -0.22
BDNF-218ENST00000533246 SMIM23A6NLE4 172 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 TTF2Q9UNY4 1162 aaKnown RBP13.66□□□□□ -0.22
BDNF-218ENST00000533246 A0A1B0GUA9 196 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 DDX39AO00148 427 aaKnown RBP13.66□□□□□ -0.22
BDNF-218ENST00000533246 ZEB2O60315 1214 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 DPP8Q6V1X1 898 aaPredicted RBP13.66□□□□□ -0.22
BDNF-218ENST00000533246 TTC14Q96N46 770 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 LRRC7Q96NW7 1537 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 TLDC2A0PJX2 215 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
BDNF-218ENST00000533246 ANKRD13CQ8N6S4 541 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
BDNF-218ENST00000533246 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 POTEJP0CG39 1038 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
BDNF-218ENST00000533246 CABP7Q86V35 215 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 RDH13Q8NBN7 331 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 SYMPKQ92797 1274 aaKnown RBP13.65□□□□□ -0.22
BDNF-218ENST00000533246 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
BDNF-218ENST00000533246 USP21Q9UK80 565 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 ARHGAP31Q2M1Z3 1444 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 CIAO1O76071 339 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 CFBP00751 764 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 CASP1P29466 404 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 NCAPH2Q6IBW4 605 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 STXBP4Q6ZWJ1 553 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
BDNF-218ENST00000533246 CETN2P41208 172 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 CLNS1AP54105 237 aaKnown RBP13.65□□□□□ -0.22
BDNF-218ENST00000533246 CKAP4Q07065 602 aaKnown RBP13.65□□□□□ -0.22
BDNF-218ENST00000533246 BLIDQ8IZY5 108 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 KIAA1524Q8TCG1 905 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 FERMT2Q96AC1 680 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 RBM17Q96I25 401 aaKnown RBP13.65□□□□□ -0.22
BDNF-218ENST00000533246 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
BDNF-218ENST00000533246 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 KRT13P13646 458 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 ATRIPQ8WXE1 791 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 IMPACTQ9P2X3 320 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 PCDHB6Q9Y5E3 794 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 SOS2Q07890 1332 aaPredicted RBP13.64□□□□□ -0.23
BDNF-218ENST00000533246 ANKRD65E5RJM6 399 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 USP17L8P0C7I0 530 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 SCG2P13521 617 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 CTNNA2P26232 953 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 CPVLQ9H3G5 476 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 GLI2P10070 1586 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
BDNF-218ENST00000533246 ETF1P62495 437 aaKnown RBP13.64□□□□□ -0.23
BDNF-218ENST00000533246 RBBP5Q15291 538 aaKnown RBP13.64□□□□□ -0.23
BDNF-218ENST00000533246 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.64□□□□□ -0.23
BDNF-218ENST00000533246 SPATS2LQ9NUQ6 558 aaKnown RBP13.64□□□□□ -0.23
BDNF-218ENST00000533246 SF3A3Q12874 501 aaKnown RBP eCLIP13.63□□□□□ -0.23
BDNF-218ENST00000533246 CALCRLQ16602 461 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 MCTP2Q6DN12 878 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 CCDC65Q8IXS2 484 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
BDNF-218ENST00000533246 EPSTI1Q96J88 318 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 PRKG1Q13976 671 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 PPP4R3AQ6IN85 833 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 RPUSD2Q8IZ73 545 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms