RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 POTEEQ6S8J3 1075 aa24.28■■□□□ 1.48
CCS-208ENST00000533244 NBPF3Q9H094 633 aa24.28■■□□□ 1.48
CCS-208ENST00000533244 RPAP3Q9H6T3 665 aaPredicted RBP24.28■■□□□ 1.48
CCS-208ENST00000533244 INCENPQ9NQS7 918 aa24.28■■□□□ 1.48
CCS-208ENST00000533244 PTPN22Q9Y2R2 807 aa24.28■■□□□ 1.48
CCS-208ENST00000533244 PSMC4P43686 418 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 GTF3C2Q8WUA4 911 aaPredicted RBP24.27■■□□□ 1.48
CCS-208ENST00000533244 CEP95Q96GE4 821 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 MTMR4Q9NYA4 1195 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 HPS5Q9UPZ3 1129 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 RLFQ13129 1914 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 TFAP4Q01664 338 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 BMP2KLQ5H9B9 411 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 FAM47AQ5JRC9 791 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 LBX2Q6XYB7 198 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 RUFY2Q8WXA3 655 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 SYNPO2Q9UMS6 1093 aa24.27■■□□□ 1.48
CCS-208ENST00000533244 TSPY3P0CV98 308 aa24.26■■□□□ 1.47
CCS-208ENST00000533244 TSPY8P0CW00 308 aa24.26■■□□□ 1.47
CCS-208ENST00000533244 PCP11498 1178 aaKnown RBP24.26■■□□□ 1.47
CCS-208ENST00000533244 HAND2P61296 217 aa24.26■■□□□ 1.47
CCS-208ENST00000533244 ATP2B2Q01814 1243 aa24.26■■□□□ 1.47
CCS-208ENST00000533244 MKL1Q969V6 931 aa24.26■■□□□ 1.47
CCS-208ENST00000533244 TXNRD2Q9NNW7 524 aa24.26■■□□□ 1.47
CCS-208ENST00000533244 RBPJLQ9UBG7 517 aa24.26■■□□□ 1.47
CCS-208ENST00000533244 MYH4Q9Y623 1939 aa24.26■■□□□ 1.47
CCS-208ENST00000533244 WDR46O15213 610 aaKnown RBP24.25■■□□□ 1.47
CCS-208ENST00000533244 SGSM2O43147 1006 aa24.25■■□□□ 1.47
CCS-208ENST00000533244 PRMT2P55345 433 aa24.25■■□□□ 1.47
CCS-208ENST00000533244 FCGRTP55899 365 aa24.25■■□□□ 1.47
CCS-208ENST00000533244 TBC1D10CQ8IV04 446 aa24.25■■□□□ 1.47
CCS-208ENST00000533244 STAG1Q8WVM7 1258 aa24.25■■□□□ 1.47
CCS-208ENST00000533244 PARP14Q460N5 1801 aa24.25■■□□□ 1.47
CCS-208ENST00000533244 A0A0G2JMZ2 1700 aa24.24■■□□□ 1.47
CCS-208ENST00000533244 SPDYE16A6NNV3 312 aaPredicted RBP24.24■■□□□ 1.47
CCS-208ENST00000533244 NOVP48745 357 aa24.24■■□□□ 1.47
CCS-208ENST00000533244 AKNAD1Q5T1N1 836 aa24.24■■□□□ 1.47
CCS-208ENST00000533244 SPICE1Q8N0Z3 855 aa24.24■■□□□ 1.47
CCS-208ENST00000533244 GOPCQ9HD26 462 aa24.24■■□□□ 1.47
CCS-208ENST00000533244 TSPY2A6NKD2 308 aa24.23■■□□□ 1.47
CCS-208ENST00000533244 FMNL1O95466 1100 aaPredicted RBP24.23■■□□□ 1.47
CCS-208ENST00000533244 TTLL1O95922 423 aa24.23■■□□□ 1.47
CCS-208ENST00000533244 CLIP2Q9UDT6 1046 aa24.23■■□□□ 1.47
CCS-208ENST00000533244 SRRDQ9UH36 339 aa24.23■■□□□ 1.47
CCS-208ENST00000533244 ZNF213O14771 459 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 CNMDO75829 334 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 COG2Q14746 738 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 TANGO6Q9C0B7 1094 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 IL17RBQ9NRM6 502 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 PPP4R2Q9NY27 417 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 CTNNA3Q9UI47 895 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 RABGAP1Q9Y3P9 1069 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 PTCH2Q9Y6C5 1203 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 MYPNQ86TC9 1320 aa24.22■■□□□ 1.47
CCS-208ENST00000533244 RANBP6O60518 1105 aaKnown RBP24.21■■□□□ 1.47
CCS-208ENST00000533244 PEX10O60683 326 aa24.21■■□□□ 1.47
CCS-208ENST00000533244 ECM2O94769 699 aaPredicted RBP24.21■■□□□ 1.47
CCS-208ENST00000533244 HOXD10P28358 340 aa24.21■■□□□ 1.47
CCS-208ENST00000533244 ERVK-9P63128 1117 aa24.21■■□□□ 1.47
CCS-208ENST00000533244 ERVK-24P63145 666 aa24.21■■□□□ 1.47
CCS-208ENST00000533244 PPP4R3BQ5MIZ7 849 aa24.21■■□□□ 1.47
CCS-208ENST00000533244 GPRC5AQ8NFJ5 357 aa24.21■■□□□ 1.47
CCS-208ENST00000533244 RNF41Q9H4P4 317 aaPredicted RBP24.21■■□□□ 1.47
CCS-208ENST00000533244 F5H6K3 240 aa24.2■■□□□ 1.46
CCS-208ENST00000533244 NDUFB10O96000 172 aa24.2■■□□□ 1.46
CCS-208ENST00000533244 NT5C2P49902 561 aa24.2■■□□□ 1.46
CCS-208ENST00000533244 KLRC3Q07444 240 aa24.2■■□□□ 1.46
CCS-208ENST00000533244 Q3C1V9 767 aa24.2■■□□□ 1.46
CCS-208ENST00000533244 MFSD6Q6ZSS7 791 aa24.2■■□□□ 1.46
CCS-208ENST00000533244 GMCL1P1Q8NEA9 526 aa24.2■■□□□ 1.46
CCS-208ENST00000533244 HOXC10Q9NYD6 342 aa24.2■■□□□ 1.46
CCS-208ENST00000533244 TNPO2O14787 897 aaKnown RBP24.19■■□□□ 1.46
CCS-208ENST00000533244 DSG3P32926 999 aa24.19■■□□□ 1.46
CCS-208ENST00000533244 PTH1RQ03431 593 aa24.19■■□□□ 1.46
CCS-208ENST00000533244 IMMTQ16891 758 aaKnown RBP24.19■■□□□ 1.46
CCS-208ENST00000533244 NKX2-3Q8TAU0 364 aa24.19■■□□□ 1.46
CCS-208ENST00000533244 PAGR1Q9BTK6 254 aa24.19■■□□□ 1.46
CCS-208ENST00000533244 TCP11L1Q9NUJ3 509 aa24.19■■□□□ 1.46
CCS-208ENST00000533244 NEDD4P46934 1319 aa24.19■■□□□ 1.46
CCS-208ENST00000533244 NMT2O60551 498 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 PRKCZQ05513 592 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 RRP12Q5JTH9 1297 aaKnown RBP24.18■■□□□ 1.46
CCS-208ENST00000533244 DOCK3Q8IZD9 2030 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 LRRC47Q8N1G4 583 aaKnown RBP24.18■■□□□ 1.46
CCS-208ENST00000533244 ARMC5Q96C12 935 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 TOMM22Q9NS69 142 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 BTBD7Q9P203 1132 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 FLOT1O75955 427 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 FAM83BQ5T0W9 1011 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 GABRQQ9UN88 632 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 ADAMTS5Q9UNA0 930 aa24.18■■□□□ 1.46
CCS-208ENST00000533244 CCDC85CA6NKD9 419 aa24.17■■□□□ 1.46
CCS-208ENST00000533244 MB21D1Q8N884 522 aa24.17■■□□□ 1.46
CCS-208ENST00000533244 ESYT1Q9BSJ8 1104 aa24.17■■□□□ 1.46
CCS-208ENST00000533244 PORCNQ9H237 461 aa24.17■■□□□ 1.46
CCS-208ENST00000533244 FBXO28Q9NVF7 368 aa24.17■■□□□ 1.46
CCS-208ENST00000533244 STX8Q9UNK0 236 aa24.17■■□□□ 1.46
CCS-208ENST00000533244 PLXNB2O15031 1838 aa24.16■■□□□ 1.46
CCS-208ENST00000533244 CAPN15O75808 1086 aa24.16■■□□□ 1.46
CCS-208ENST00000533244 IRF5Q13568 498 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms