RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 JAG1P78504 1218 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 ANO1Q5XXA6 986 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 CCDC174Q6PII3 467 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 LBX2Q6XYB7 198 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 ZNF384Q8TF68 577 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 NSUN4Q96CB9 384 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 PRDM12Q9H4Q4 367 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 PHF24Q9UPV7 400 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 DNAH12Q6ZR08 3092 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 UBTFL1P0CB47 393 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-213ENST00000533149 USP14P54578 494 aa13.76□□□□□ -0.21
TRAPPC4-213ENST00000533149 CCDC85BQ15834 202 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-213ENST00000533149 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
TRAPPC4-213ENST00000533149 CATSPERGQ6ZRH7 1159 aa13.76□□□□□ -0.21
TRAPPC4-213ENST00000533149 CCDC129Q6ZRS4 1044 aa13.76□□□□□ -0.21
TRAPPC4-213ENST00000533149 METTL16Q86W50 562 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-213ENST00000533149 GDF11O95390 407 aa13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 PLCG2P16885 1265 aa13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 IGFBP4P22692 258 aa13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 HDAC1Q13547 482 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 CENPQQ7L2Z9 268 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 SIRT2Q8IXJ6 389 aa13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 FEZ1Q99689 392 aa13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 PBX4Q9BYU1 374 aa13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 RAI14Q9P0K7 980 aa13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 CXXC1Q9P0U4 656 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-213ENST00000533149 DCDC2CA8MYV0 355 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 BAG3O95817 575 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 ADORA2AP29274 412 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 TIMM10P62072 90 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 RNF180Q86T96 592 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 RPAP2Q8IXW5 612 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 SLC44A5Q8NCS7 719 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 SH3RF3Q8TEJ3 882 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 TOX2Q96NM4 488 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 DNAJC18Q9H819 358 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 BTBD7Q9P203 1132 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
TRAPPC4-213ENST00000533149 RARBP10826 455 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 BMP1P13497 986 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 RAB30Q15771 203 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 SHROOM1Q2M3G4 852 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 CEP85Q6P2H3 762 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 SPATA5Q8NB90 893 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 XAGE2Q96GT9 111 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 NECAB3Q96P71 396 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■□□□ 14
TRAPPC4-213ENST00000533149 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 MSRAQ9UJ68 235 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
TRAPPC4-213ENST00000533149 TIMP1P01033 207 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 HLA-DOAP06340 250 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 VCAM1P19320 739 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 PBX2P40425 430 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 FAAP100Q0VG06 881 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 PPIGQ13427 754 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 ADGRE1Q14246 886 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 TMEM31Q5JXX7 168 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 PRAMEF19Q5SWL8 479 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 SHCBP1Q8NEM2 672 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 KIAA1683Q9H0B3 1180 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
TRAPPC4-213ENST00000533149 FLT1P17948 1338 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 A0A1B0GUL7 405 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 A0A1W2PQ45 241 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 A0A1W2PQY0 241 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 SPDYE16A6NNV3 312 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 GH2P01242 217 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 MFSD5Q6N075 450 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 TBC1D9Q6ZT07 1266 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 ABRAQ8N0Z2 381 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 MOV10L1Q9BXT6 1211 aaKnown RBP13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 COPRSQ9NQ92 184 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 HOXC10Q9NYD6 342 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 LRP2BPQ9P2M1 347 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
TRAPPC4-213ENST00000533149 ZNF236Q9UL36 1845 aa13.71□□□□□ -0.22
TRAPPC4-213ENST00000533149 GRXCR1A8MXD5 290 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 COBLO75128 1261 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 GORABQ5T7V8 394 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 RASIP1Q5U651 963 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 MROH8Q9H579 483 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 RPAP3Q9H6T3 665 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 SLC28A3Q9HAS3 691 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 AATFQ9NY61 560 aaKnown RBP eCLIP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms