RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 PDLIM7Q9NR12 457 aa17.62■□□□□ 0.41
CDC27-209ENST00000532893 FRMPD3Q5JV73 1810 aa17.62■□□□□ 0.41
CDC27-209ENST00000532893 SPTBN5Q9NRC6 3674 aaKnown RBP17.61■□□□□ 0.41
CDC27-209ENST00000532893 IGSF3O75054 1194 aa17.61■□□□□ 0.41
CDC27-209ENST00000532893 FOSL2P15408 326 aa17.61■□□□□ 0.41
CDC27-209ENST00000532893 GUCY1A2P33402 732 aa17.61■□□□□ 0.41
CDC27-209ENST00000532893 COG2Q14746 738 aa17.61■□□□□ 0.41
CDC27-209ENST00000532893 LRRC41Q15345 812 aa17.61■□□□□ 0.41
CDC27-209ENST00000532893 HOXC10Q9NYD6 342 aa17.61■□□□□ 0.41
CDC27-209ENST00000532893 CDK5RAP2Q96SN8 1893 aa17.61■□□□□ 0.41
CDC27-209ENST00000532893 TRIM27P14373 513 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 ERCC3P19447 782 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 SHMT1P34896 483 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 PLCD1P51178 756 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 TLE2Q04725 743 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 SEPT2Q15019 361 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 SNX17Q15036 470 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 MAGEB6Q8N7X4 407 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 SPATC1LQ9H0A9 340 aa17.6■□□□□ 0.41
CDC27-209ENST00000532893 CDH23Q9H251 3354 aa17.59■□□□□ 0.41
CDC27-209ENST00000532893 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
CDC27-209ENST00000532893 SURF6O75683 361 aaKnown RBP17.59■□□□□ 0.41
CDC27-209ENST00000532893 POLA2Q14181 598 aa17.59■□□□□ 0.41
CDC27-209ENST00000532893 CERS3Q8IU89 383 aa17.59■□□□□ 0.41
CDC27-209ENST00000532893 FRAT1Q92837 279 aaPredicted RBP17.59■□□□□ 0.41
CDC27-209ENST00000532893 CCDC8Q9H0W5 538 aaPredicted RBP17.59■□□□□ 0.41
CDC27-209ENST00000532893 TLR7Q9NYK1 1049 aaKnown RBP17.59■□□□□ 0.41
CDC27-209ENST00000532893 DBNLQ9UJU6 430 aaKnown RBP17.59■□□□□ 0.41
CDC27-209ENST00000532893 RLFQ13129 1914 aa17.59■□□□□ 0.41
CDC27-209ENST00000532893 MYO5AQ9Y4I1 1855 aaKnown RBP17.58■□□□□ 0.41
CDC27-209ENST00000532893 FOCADQ5VW36 1801 aa17.58■□□□□ 0.41
CDC27-209ENST00000532893 A0A1W2PRG0 241 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 BCAR3O75815 825 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 ITGB8P26012 769 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 PLS1Q14651 629 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 FAM47AQ5JRC9 791 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 SHCBP1Q8NEM2 672 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
CDC27-209ENST00000532893 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 SLC5A4Q9NY91 659 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 TACC3Q9Y6A5 838 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 LTBP2Q14767 1821 aa17.58■□□□□ 0.4
CDC27-209ENST00000532893 MYH1P12882 1939 aa17.57■□□□□ 0.4
CDC27-209ENST00000532893 MPHOSPH10O00566 681 aaKnown RBP17.57■□□□□ 0.4
CDC27-209ENST00000532893 POLR3DP05423 398 aaPredicted RBP17.57■□□□□ 0.4
CDC27-209ENST00000532893 EPHB4P54760 987 aa17.57■□□□□ 0.4
CDC27-209ENST00000532893 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
CDC27-209ENST00000532893 C1orf53Q5VUE5 145 aa17.57■□□□□ 0.4
CDC27-209ENST00000532893 NCAPG2Q86XI2 1143 aa17.57■□□□□ 0.4
CDC27-209ENST00000532893 SSH3Q8TE77 659 aa17.57■□□□□ 0.4
CDC27-209ENST00000532893 RNPC3Q96LT9 517 aaKnown RBP17.57■□□□□ 0.4
CDC27-209ENST00000532893 ANTXR1Q9H6X2 564 aa17.57■□□□□ 0.4
CDC27-209ENST00000532893 KIAA1755Q5JYT7 1200 aa17.56■□□□□ 0.4
CDC27-209ENST00000532893 SAMD1Q6SPF0 538 aaPredicted RBP17.56■□□□□ 0.4
CDC27-209ENST00000532893 MAML3Q96JK9 1138 aa17.56■□□□□ 0.4
CDC27-209ENST00000532893 DSG3P32926 999 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 EVX2Q03828 476 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 GABPAQ06546 454 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 MAP3K12Q12852 859 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 GRIN2CQ14957 1233 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 ABRAQ8N0Z2 381 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 MB21D1Q8N884 522 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 EAF2Q96CJ1 260 aaPredicted RBP17.55■□□□□ 0.4
CDC27-209ENST00000532893 MROH8Q9H579 483 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 PHF24Q9UPV7 400 aa17.55■□□□□ 0.4
CDC27-209ENST00000532893 SMCHD1A6NHR9 2005 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 TMEM265A0A087WTH1 108 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 PGK1P00558 417 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 CLTBP09497 229 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 FCER1AP12319 257 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 RAG1P15918 1043 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 USP38Q8NB14 1042 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 RIOK1Q9BRS2 568 aaKnown RBP17.54■□□□□ 0.4
CDC27-209ENST00000532893 XPNPEP3Q9NQH7 507 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
CDC27-209ENST00000532893 PQBP1O60828 265 aaKnown RBP17.53■□□□□ 0.4
CDC27-209ENST00000532893 FLOT1O75955 427 aa17.53■□□□□ 0.4
CDC27-209ENST00000532893 RARBP10826 455 aa17.53■□□□□ 0.4
CDC27-209ENST00000532893 SPICE1Q8N0Z3 855 aa17.53■□□□□ 0.4
CDC27-209ENST00000532893 TMEM57Q8N5G2 664 aa17.53■□□□□ 0.4
CDC27-209ENST00000532893 C1orf115Q9H7X2 142 aa17.53■□□□□ 0.4
CDC27-209ENST00000532893 TMEM39AQ9NV64 488 aa17.53■□□□□ 0.4
CDC27-209ENST00000532893 MCM9Q9NXL9 1143 aa17.53■□□□□ 0.4
CDC27-209ENST00000532893 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
CDC27-209ENST00000532893 MAGEB6P1A0A0J9YX57 407 aa17.52■□□□□ 0.4
CDC27-209ENST00000532893 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.52■□□□□ 0.4
CDC27-209ENST00000532893 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.52■□□□□ 0.4
CDC27-209ENST00000532893 KIAA0355O15063 1070 aa17.52■□□□□ 0.4
CDC27-209ENST00000532893 TAL1P17542 331 aaPredicted RBP17.52■□□□□ 0.4
CDC27-209ENST00000532893 FPGSQ05932 587 aa17.52■□□□□ 0.4
CDC27-209ENST00000532893 TJAP1Q5JTD0 557 aa17.52■□□□□ 0.4
CDC27-209ENST00000532893 RNF180Q86T96 592 aa17.52■□□□□ 0.4
CDC27-209ENST00000532893 PGK2P07205 417 aa17.51■□□□□ 0.39
CDC27-209ENST00000532893 DNAJB2P25686 324 aa17.51■□□□□ 0.39
CDC27-209ENST00000532893 SIAH1Q8IUQ4 282 aa17.51■□□□□ 0.39
CDC27-209ENST00000532893 SLC44A5Q8NCS7 719 aa17.51■□□□□ 0.39
CDC27-209ENST00000532893 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
CDC27-209ENST00000532893 NRBP1Q9UHY1 535 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms