RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PP2D1A8MPX8 630 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 KIF2AO00139 706 aaPredicted RBP16.95■□□□□ 0.3
SSH3-210ENST00000532881 NLRP5P59047 1200 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 CUL4BQ13620 913 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 SPATA20Q8TB22 786 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 CEP131Q9UPN4 1083 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
SSH3-210ENST00000532881 CNTNAP5Q8WYK1 1306 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 RTL9Q8NET4 1388 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 RNF225M0QZC1 329 aaPredicted RBP16.95■□□□□ 0.3
SSH3-210ENST00000532881 ARHGAP6O43182 974 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 UBE4AQ14139 1066 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 TNFRSF25Q93038 417 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 XDHP47989 1333 aa16.95■□□□□ 0.3
SSH3-210ENST00000532881 SLFN14P0C7P3 912 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 RAD9BQ6WBX8 426 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 SLC44A5Q8NCS7 719 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 RGS22Q8NE09 1264 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 FAM205AQ6ZU69 1335 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 COL14A1Q05707 1796 aaKnown RBP16.94■□□□□ 0.3
SSH3-210ENST00000532881 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 TSPY2A6NKD2 308 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 PPP1R3GB7ZBB8 358 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 XBP1P17861 261 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 TYW1BQ6NUM6 668 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 MCM9Q9NXL9 1143 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 SYNRGQ9UMZ2 1314 aa16.94■□□□□ 0.3
SSH3-210ENST00000532881 PLCH1Q4KWH8 1693 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 KCNJ6P48051 423 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 DIXDC1Q155Q3 683 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 VPS16Q9H269 839 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 USP17L3A6NCW0 530 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 USP17L4A6NCW7 530 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 CASP14P31944 242 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 RPS8P62241 208 aaKnown RBP16.93■□□□□ 0.3
SSH3-210ENST00000532881 RCSD1Q6JBY9 416 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 USP17L1Q7RTZ2 530 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 IGSF22Q8N9C0 903 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 MNS1Q8NEH6 495 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 CTCFLQ8NI51 663 aaPredicted RBP16.93■□□□□ 0.3
SSH3-210ENST00000532881 ZNF652Q9Y2D9 606 aa16.93■□□□□ 0.3
SSH3-210ENST00000532881 A0A1B0GTH6 734 aa16.92■□□□□ 0.3
SSH3-210ENST00000532881 H2AFXP16104 143 aaPredicted RBP16.92■□□□□ 0.3
SSH3-210ENST00000532881 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
SSH3-210ENST00000532881 SH3RF1Q7Z6J0 888 aa16.92■□□□□ 0.3
SSH3-210ENST00000532881 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
SSH3-210ENST00000532881 UBXN4Q92575 508 aa16.92■□□□□ 0.3
SSH3-210ENST00000532881 GDAQ9Y2T3 454 aa16.92■□□□□ 0.3
SSH3-210ENST00000532881 GOLGA8HP0CJ92 632 aa16.92■□□□□ 0.3
SSH3-210ENST00000532881 HIBADHP31937 336 aaKnown RBP16.92■□□□□ 0.3
SSH3-210ENST00000532881 FXR1P51114 621 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSH3-210ENST00000532881 PHLPP2Q6ZVD8 1323 aa16.92■□□□□ 0.3
SSH3-210ENST00000532881 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
SSH3-210ENST00000532881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSH3-210ENST00000532881 CASQ1P31415 396 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 TFAP4Q01664 338 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 ZNF771Q7L3S4 317 aaPredicted RBP16.91■□□□□ 0.3
SSH3-210ENST00000532881 TRIM49BA6NDI0 452 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 ZSCAN12O43309 604 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 STX10O60499 249 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 SCG2P13521 617 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 SLC35G1Q2M3R5 365 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 TEX35Q5T0J7 233 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 SPATA1Q5VX52 437 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 NBPF5PQ86XG9 351 aaPredicted RBP16.91■□□□□ 0.3
SSH3-210ENST00000532881 ADD3Q9UEY8 706 aaKnown RBP16.91■□□□□ 0.3
SSH3-210ENST00000532881 DACH1Q9UI36 760 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 FHOD1Q9Y613 1164 aa16.91■□□□□ 0.3
SSH3-210ENST00000532881 AKR1B15C9JRZ8 316 aaPredicted RBP16.9■□□□□ 0.3
SSH3-210ENST00000532881 TADA3O75528 432 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 KRT222Q8N1A0 295 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 ACRBPQ8NEB7 543 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 TAB2Q9NYJ8 693 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 SAP30BPQ9UHR5 308 aaKnown RBP16.9■□□□□ 0.3
SSH3-210ENST00000532881 ROBO1Q9Y6N7 1651 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 PIP4K2BP78356 416 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 ATP2C1P98194 919 aaPredicted RBP16.9■□□□□ 0.3
SSH3-210ENST00000532881 ELOA2Q8IYF1 753 aaPredicted RBP16.9■□□□□ 0.3
SSH3-210ENST00000532881 CCDC12Q8WUD4 166 aaPredicted RBP16.9■□□□□ 0.3
SSH3-210ENST00000532881 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 TFR2Q9UP52 801 aa16.9■□□□□ 0.3
SSH3-210ENST00000532881 E2F4Q16254 413 aa16.89■□□□□ 0.3
SSH3-210ENST00000532881 TRIML1Q8N9V2 468 aa16.89■□□□□ 0.3
SSH3-210ENST00000532881 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.3
SSH3-210ENST00000532881 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.3
SSH3-210ENST00000532881 GYPCP04921 128 aa16.89■□□□□ 0.29
SSH3-210ENST00000532881 FGRP09769 529 aa16.89■□□□□ 0.29
SSH3-210ENST00000532881 ERCC5P28715 1186 aaPredicted RBP16.89■□□□□ 0.29
SSH3-210ENST00000532881 MTA3Q9BTC8 594 aa16.89■□□□□ 0.29
SSH3-210ENST00000532881 CRNKL1Q9BZJ0 848 aaKnown RBP16.89■□□□□ 0.29
SSH3-210ENST00000532881 TMEM60Q9H2L4 133 aa16.89■□□□□ 0.29
SSH3-210ENST00000532881 BRMS1Q9HCU9 246 aa16.89■□□□□ 0.29
SSH3-210ENST00000532881 GNPATO15228 680 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 NFIXQ14938 502 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 PDXDC2PQ6P474 469 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 LRRC15Q8TF66 581 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms