RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 SLF1Q9BQI6 1058 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 ATP8A2Q9NTI2 1148 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 DDX41Q9UJV9 622 aaKnown RBP8.38□□□□□ -1.07
CTNND1-233ENST00000532787 BZW2Q9Y6E2 419 aaKnown RBP8.38□□□□□ -1.07
CTNND1-233ENST00000532787 PCP11498 1178 aaKnown RBP8.38□□□□□ -1.07
CTNND1-233ENST00000532787 GNGT1P63211 74 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 LMNB2Q03252 620 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 HADHQ16836 314 aaKnown RBP8.38□□□□□ -1.07
CTNND1-233ENST00000532787 TRIM42Q8IWZ5 723 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 TSPYL6Q8N831 410 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 SLC17A8Q8NDX2 589 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 XAGE2Q96GT9 111 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 RAB20Q9NX57 234 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 ARPP21Q9UBL0 812 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-233ENST00000532787 TRPC6Q9Y210 931 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 PCDHB13Q9Y5F0 798 aa8.38□□□□□ -1.07
CTNND1-233ENST00000532787 DNAJC8O75937 253 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 WHAMMQ8TF30 809 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 TUBB6Q9BUF5 446 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 VPS37BQ9H9H4 285 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 ZBTB21Q9ULJ3 1066 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 PFDN6O15212 129 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 NCAPH2Q6IBW4 605 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 OTUD6AQ7L8S5 288 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 JDP2Q8WYK2 163 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 CSRNP1Q96S65 589 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 CUEDC2Q9H467 287 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 BCL2L12Q9HB09 334 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 PPANQ9NQ55 473 aaKnown RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 KCNJ18B7U540 433 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 PLXNC1O60486 1568 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 TBC1D8O95759 1140 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 ATP5JP18859 108 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 RXRAP19793 462 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 CMA1P23946 247 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 BLMP54132 1417 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 KCNJ12Q14500 433 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 FAM135BQ49AJ0 1406 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 PALM2Q8IXS6 379 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 HACE1Q8IYU2 909 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 MYCT1Q8N699 235 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 RABGGTAQ92696 567 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 XPO4Q9C0E2 1151 aaKnown RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 BAIAP2L1Q9UHR4 511 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 SH3TC1Q8TE82 1336 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 HOXC9P31274 260 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 ARHGAP4P98171 946 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 RBBP5Q15291 538 aaKnown RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 BEND3Q5T5X7 828 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 SLFN12Q8IYM2 578 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 RSAD2Q8WXG1 361 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 FAM81BQ96LP2 452 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 RILPQ96NA2 401 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 KRT12Q99456 494 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 MRPL44Q9H9J2 332 aaKnown RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 VEZTQ9HBM0 779 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 GOLGA8CPA6NN73 597 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 THAP12O43422 761 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 ZBED4O75132 1171 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 ITGA6P23229 1130 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 GARSP41250 739 aaKnown RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 ETF1P62495 437 aaKnown RBP8.37□□□□□ -1.07
CTNND1-233ENST00000532787 NFATC2IPQ8NCF5 419 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 PPP2R2CQ9Y2T4 447 aa8.37□□□□□ -1.07
CTNND1-233ENST00000532787 A0A1W2PP64 1363 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 TXNDC9O14530 226 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 GTPBP6O43824 516 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-233ENST00000532787 GCNT3O95395 438 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 MORC3Q14149 939 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 RRAGAQ7L523 313 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 CCDC13Q8IYE1 715 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 MYOCDQ8IZQ8 938 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 TBC1D22AQ8WUA7 517 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 TRIM31Q9BZY9 425 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 RNF14Q9UBS8 474 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 CAPN7Q9Y6W3 813 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 ARHGEF10O15013 1369 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 XRCC5P13010 732 aaKnown RBP8.36□□□□□ -1.07
CTNND1-233ENST00000532787 CUL4BQ13620 913 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 SNCBQ16143 134 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 DBN1Q16643 649 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 AKNAD1Q5T1N1 836 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 SUPT20HQ8NEM7 779 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 EYA1Q99502 592 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 LSM14BQ9BX40 385 aaKnown RBP8.36□□□□□ -1.07
CTNND1-233ENST00000532787 ARMT1Q9H993 441 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 PICK1Q9NRD5 415 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 KRIT1O00522 736 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 SEC24BO95487 1268 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 CA8P35219 290 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 LAD1O00515 517 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 CHL1O00533 1208 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 PFKFB2O60825 505 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 CDC37L1Q7L3B6 337 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 CCDC170Q8IYT3 715 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 AZI2Q9H6S1 392 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms