RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 USP11P51784 963 aa11.21□□□□□ -0.61
KNL1-209ENST00000532347 PDE4BQ07343 736 aa11.21□□□□□ -0.61
KNL1-209ENST00000532347 UVSSAQ2YD98 709 aa11.21□□□□□ -0.61
KNL1-209ENST00000532347 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.21□□□□□ -0.61
KNL1-209ENST00000532347 UTP4Q969X6 686 aaKnown RBP11.21□□□□□ -0.61
KNL1-209ENST00000532347 PGRP06401 933 aa11.2□□□□□ -0.62
KNL1-209ENST00000532347 PLCG1P19174 1290 aa11.2□□□□□ -0.62
KNL1-209ENST00000532347 SF3A1Q15459 793 aaKnown RBP11.2□□□□□ -0.62
KNL1-209ENST00000532347 CDPF1Q6NVV7 123 aa11.2□□□□□ -0.62
KNL1-209ENST00000532347 ARMC10Q8N2F6 343 aa11.2□□□□□ -0.62
KNL1-209ENST00000532347 ISL2Q96A47 359 aa11.2□□□□□ -0.62
KNL1-209ENST00000532347 FERD3LQ96RJ6 166 aa11.2□□□□□ -0.62
KNL1-209ENST00000532347 SSBP4Q9BWG4 385 aaPredicted RBP11.2□□□□□ -0.62
KNL1-209ENST00000532347 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.19□□□□□ -0.62
KNL1-209ENST00000532347 RNGTTO60942 597 aaKnown RBP11.19□□□□□ -0.62
KNL1-209ENST00000532347 RAB6AP20340 208 aa11.19□□□□□ -0.62
KNL1-209ENST00000532347 SGO2Q562F6 1265 aa11.19□□□□□ -0.62
KNL1-209ENST00000532347 CCDC81Q6ZN84 652 aa11.19□□□□□ -0.62
KNL1-209ENST00000532347 MYRFLQ96LU7 910 aa11.19□□□□□ -0.62
KNL1-209ENST00000532347 ACSS3Q9H6R3 686 aa11.19□□□□□ -0.62
KNL1-209ENST00000532347 REV1Q9UBZ9 1251 aa11.19□□□□□ -0.62
KNL1-209ENST00000532347 ZNRF3Q9ULT6 936 aa11.19□□□□□ -0.62
KNL1-209ENST00000532347 ALKQ9UM73 1620 aa11.19□□□□□ -0.62
KNL1-209ENST00000532347 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 GDF11O95390 407 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 BMP3P12645 472 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 UBE3DQ7Z6J8 389 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 SMYD4Q8IYR2 804 aaPredicted RBP11.18□□□□□ -0.62
KNL1-209ENST00000532347 ZNF507Q8TCN5 953 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 FBLIM1Q8WUP2 373 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 FBRSQ9HAH7 460 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 ADAM30Q9UKF2 790 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 MAST1Q9Y2H9 1570 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 CAMSAP2Q08AD1 1489 aa11.18□□□□□ -0.62
KNL1-209ENST00000532347 ITGB2P05107 769 aa11.17□□□□□ -0.62
KNL1-209ENST00000532347 GATA4P43694 442 aa11.17□□□□□ -0.62
KNL1-209ENST00000532347 TMEM201Q5SNT2 666 aa11.17□□□□□ -0.62
KNL1-209ENST00000532347 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
KNL1-209ENST00000532347 SRRTQ9BXP5 876 aaKnown RBP11.17□□□□□ -0.62
KNL1-209ENST00000532347 STRIP2Q9ULQ0 834 aa11.17□□□□□ -0.62
KNL1-209ENST00000532347 LRRC7Q96NW7 1537 aa11.17□□□□□ -0.62
KNL1-209ENST00000532347 KDM5AP29375 1690 aaKnown RBP11.17□□□□□ -0.62
KNL1-209ENST00000532347 SLIT1O75093 1534 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 KIF3BO15066 747 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 SSBP05455 408 aaKnown RBP eCLIP11.16□□□□□ -0.62
KNL1-209ENST00000532347 PLA2G4EQ3MJ16 856 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 CDC37L1Q7L3B6 337 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 FAM20CQ8IXL6 584 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 TMEM151AQ8N4L1 468 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 CPLX3Q8WVH0 158 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 ACSF2Q96CM8 615 aaPredicted RBP11.16□□□□□ -0.62
KNL1-209ENST00000532347 DRC1Q96MC2 740 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 SEMA6CQ9H3T2 930 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 ARHGAP31Q2M1Z3 1444 aa11.16□□□□□ -0.62
KNL1-209ENST00000532347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
KNL1-209ENST00000532347 ARHGAP23Q9P227 1491 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 DNAJA2O60884 412 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 NFICP08651 508 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 IMPDH2P12268 514 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 ATP2B1P20020 1258 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 MAP4P27816 1152 aaKnown RBP11.15□□□□□ -0.62
KNL1-209ENST00000532347 NKG7Q16617 165 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 HID1Q8IV36 788 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 EZH1Q92800 747 aaPredicted RBP11.15□□□□□ -0.62
KNL1-209ENST00000532347 YIPF2Q9BWQ6 316 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 SSU72Q9NP77 194 aaKnown RBP11.15□□□□□ -0.62
KNL1-209ENST00000532347 PPP1R1BQ9UD71 204 aaPredicted RBP11.15□□□□□ -0.62
KNL1-209ENST00000532347 TJP2Q9UDY2 1190 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 DAGLAQ9Y4D2 1042 aa11.15□□□□□ -0.62
KNL1-209ENST00000532347 ABCC3O15438 1527 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 ERVK-7P63135 1459 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
KNL1-209ENST00000532347 TSPY4P0CV99 314 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 TSPY10P0CW01 314 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.14□□□□□ -0.63
KNL1-209ENST00000532347 KCT2Q8NC54 265 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 SHDQ96IW2 340 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 ANTXR1Q9H6X2 564 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 PCOLCE2Q9UKZ9 415 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 FAM135BQ49AJ0 1406 aa11.14□□□□□ -0.63
KNL1-209ENST00000532347 DHX15O43143 795 aaKnown RBP11.13□□□□□ -0.63
KNL1-209ENST00000532347 RXRBP28702 533 aa11.13□□□□□ -0.63
KNL1-209ENST00000532347 EIF6P56537 245 aaKnown RBP11.13□□□□□ -0.63
KNL1-209ENST00000532347 SLBPQ14493 270 aaKnown RBP eCLIP11.13□□□□□ -0.63
KNL1-209ENST00000532347 MCATQ8IVS2 390 aaKnown RBP11.13□□□□□ -0.63
KNL1-209ENST00000532347 TMEM87BQ96K49 555 aa11.13□□□□□ -0.63
KNL1-209ENST00000532347 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
KNL1-209ENST00000532347 KCNF1Q9H3M0 494 aa11.13□□□□□ -0.63
KNL1-209ENST00000532347 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
KNL1-209ENST00000532347 MRVI1Q9Y6F6 885 aa11.13□□□□□ -0.63
KNL1-209ENST00000532347 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
KNL1-209ENST00000532347 DYNC1LI2O43237 492 aaPredicted RBP11.12□□□□□ -0.63
KNL1-209ENST00000532347 GIPRP48546 466 aa11.12□□□□□ -0.63
KNL1-209ENST00000532347 MRPL41Q8IXM3 137 aaKnown RBP11.12□□□□□ -0.63
KNL1-209ENST00000532347 RBBP8NLQ8NC74 664 aaPredicted RBP11.12□□□□□ -0.63
KNL1-209ENST00000532347 DHX38Q92620 1227 aaKnown RBP11.12□□□□□ -0.63
KNL1-209ENST00000532347 TP53INP1Q96A56 240 aa11.12□□□□□ -0.63
KNL1-209ENST00000532347 ANAPC16Q96DE5 110 aa11.12□□□□□ -0.63
KNL1-209ENST00000532347 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
KNL1-209ENST00000532347 GMIPQ9P107 970 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms