RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 KCNK17Q96T54 332 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 TBC1D2Q9BYX2 928 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 TCP11L1Q9NUJ3 509 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 TACC3Q9Y6A5 838 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 MYH8P13535 1937 aa14.76□□□□□ -0.05
COPB1-208ENST00000532088 GREB1LQ9C091 1923 aaPredicted RBP14.75□□□□□ -0.05
COPB1-208ENST00000532088 CELF2O95319 508 aaKnown RBP14.75□□□□□ -0.05
COPB1-208ENST00000532088 ASNSP08243 561 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 LDLRAD1Q5T700 205 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 MB21D2Q8IYB1 491 aaPredicted RBP14.75□□□□□ -0.05
COPB1-208ENST00000532088 ANKRD13AQ8IZ07 590 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 SCYL3Q8IZE3 742 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 C2orf69Q8N8R5 385 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 NEK1Q96PY6 1258 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 WRNIP1Q96S55 665 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 GBA2Q9HCG7 927 aaPredicted RBP14.75□□□□□ -0.05
COPB1-208ENST00000532088 CABP5Q9NP86 173 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 TAF6LQ9Y6J9 622 aa14.75□□□□□ -0.05
COPB1-208ENST00000532088 TSPY2A6NKD2 308 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 FAM196BA6NMK8 535 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 MCM5P33992 734 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 NOVP48745 357 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 ABCB5Q2M3G0 1257 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 DLK2Q6UY11 383 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 IQCA1Q86XH1 822 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 FBXL16Q8N461 479 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 SYNPO2Q9UMS6 1093 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 ANGEL1Q9UNK9 670 aaKnown RBP14.74□□□□□ -0.05
COPB1-208ENST00000532088 DOCK1Q14185 1865 aa14.74□□□□□ -0.05
COPB1-208ENST00000532088 IGKV6D-41A0A0C4DH26 115 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 B4E1Z4 1266 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 RANBP6O60518 1105 aaKnown RBP14.73□□□□□ -0.05
COPB1-208ENST00000532088 KDM4AO75164 1064 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 PRDM1O75626 825 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 TSPY3P0CV98 308 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 TSPY8P0CW00 308 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 AKR1B1P15121 316 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 PSEN2P49810 448 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 TFAP4Q01664 338 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 RRP1BQ14684 758 aaKnown RBP14.73□□□□□ -0.05
COPB1-208ENST00000532088 ADCK5Q3MIX3 580 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 RRP12Q5JTH9 1297 aaKnown RBP14.73□□□□□ -0.05
COPB1-208ENST00000532088 CST9Q5W186 159 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 BLOC1S2Q6QNY1 142 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.73□□□□□ -0.05
COPB1-208ENST00000532088 DHX32Q7L7V1 743 aaKnown RBP14.73□□□□□ -0.05
COPB1-208ENST00000532088 STK11IPQ8N1F8 1099 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 TMEM87BQ96K49 555 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 TOMM22Q9NS69 142 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 ZSWIM5Q9P217 1185 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 ZBTB21Q9ULJ3 1066 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 CSADQ9Y600 493 aa14.73□□□□□ -0.05
COPB1-208ENST00000532088 SLURP2P0DP57 97 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 INPP5BP32019 993 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 EXOSC10Q01780 885 aaKnown RBP14.72□□□□□ -0.05
COPB1-208ENST00000532088 TTLL12Q14166 644 aaPredicted RBP14.72□□□□□ -0.05
COPB1-208ENST00000532088 SART3Q15020 963 aaKnown RBP14.72□□□□□ -0.05
COPB1-208ENST00000532088 RUFY3Q7L099 469 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 ANKS1AQ92625 1134 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 HHIPL1Q96JK4 782 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 JAKMIP1Q96N16 626 aaKnown RBP14.72□□□□□ -0.05
COPB1-208ENST00000532088 TTC14Q96N46 770 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.72□□□□□ -0.05
COPB1-208ENST00000532088 ZNF408Q9H9D4 720 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 KANSL2Q9H9L4 492 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 INCENPQ9NQS7 918 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 PICK1Q9NRD5 415 aa14.72□□□□□ -0.05
COPB1-208ENST00000532088 OTOFQ9HC10 1997 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 GH2P01242 217 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 CASTP20810 708 aaKnown RBP14.71□□□□□ -0.05
COPB1-208ENST00000532088 RPS6KB1P23443 525 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 GUCY1A2P33402 732 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 FMR1Q06787 632 aaKnown RBP eCLIP14.71□□□□□ -0.05
COPB1-208ENST00000532088 VGLL4Q14135 290 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 RABEP1Q15276 862 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 DGKHQ86XP1 1220 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 TMTC2Q8N394 836 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 KIF2CQ99661 725 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 ALDH8A1Q9H2A2 487 aaPredicted RBP14.71□□□□□ -0.05
COPB1-208ENST00000532088 AS3MTQ9HBK9 375 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 MTMR4Q9NYA4 1195 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 NYAP2Q9P242 653 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 RBM27Q9P2N5 1060 aaKnown RBP14.71□□□□□ -0.05
COPB1-208ENST00000532088 CYP46A1Q9Y6A2 500 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 SNCAIPQ9Y6H5 919 aa14.71□□□□□ -0.05
COPB1-208ENST00000532088 ATAD5Q96QE3 1844 aa14.71□□□□□ -0.06
COPB1-208ENST00000532088 ERICH2A1L162 156 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 TMEM88BA6NKF7 163 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 USP17L5A8MUK1 530 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 MPHOSPH10O00566 681 aaKnown RBP14.7□□□□□ -0.06
COPB1-208ENST00000532088 GDF11O95390 407 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 ANTXR2P58335 489 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 PPATQ06203 517 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 PRKG1Q13976 671 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 FAM47AQ5JRC9 791 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 CYB5R4Q7L1T6 521 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 ERO1BQ86YB8 467 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 ZKSCAN4Q969J2 545 aaPredicted RBP14.7□□□□□ -0.06
COPB1-208ENST00000532088 MKL1Q969V6 931 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 ZSCAN10Q96SZ4 725 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms