RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 USP17L20D6RJB6 530 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 ORC4O43929 436 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 CENPBP07199 599 aaPredicted RBP12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 VCAM1P19320 739 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 NOVP48745 357 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 FCGRTP55899 365 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 ICA1Q05084 483 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 USP17L24Q0WX57 530 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 CWC27Q6UX04 472 aaKnown RBP12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 CATSPERGQ6ZRH7 1159 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 NEDD1Q8NHV4 660 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 DSCC1Q9BVC3 393 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 ARHGEF10LQ9HCE6 1279 aa12.86□□□□□ -0.35
GPATCH4-216ENST00000531900 EEF2P13639 858 aaKnown RBP12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 EN2P19622 333 aaPredicted RBP12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 CHMLP26374 656 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 CTGFP29279 349 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 HERVK_113P62684 666 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 SH3TC2Q8TF17 1288 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 P2RX7Q99572 595 aaKnown RBP12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 FEZ1Q99689 392 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 MYH4Q9Y623 1939 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 PARP14Q460N5 1801 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 MYPNQ86TC9 1320 aa12.85□□□□□ -0.35
GPATCH4-216ENST00000531900 LAMA4Q16363 1823 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 NEFLP07196 543 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 GRK4P32298 578 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 IRX3P78415 501 aaPredicted RBP12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 BMP2KLQ5H9B9 411 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 MTMR4Q9NYA4 1195 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 RBPJLQ9UBG7 517 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
GPATCH4-216ENST00000531900 ZSWIM8A7E2V4 1837 aa12.83□□□□□ -0.35
GPATCH4-216ENST00000531900 MKI67P46013 3256 aaKnown RBP12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 WDR46O15213 610 aaKnown RBP12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 PRDM1O75626 825 aa12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 MYCP01106 439 aaPredicted RBP12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 KIAA1755Q5JYT7 1200 aa12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 RUFY2Q8WXA3 655 aa12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 IL25Q9H293 177 aa12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 TCP11L1Q9NUJ3 509 aa12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 HOXC10Q9NYD6 342 aa12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 ADAMTS5Q9UNA0 930 aa12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
GPATCH4-216ENST00000531900 TNPO2O14787 897 aaKnown RBP12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 SGSM2O43147 1006 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 TTLL1O95922 423 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 UBXN2AP68543 259 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 TFAP4Q01664 338 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 COG2Q14746 738 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 AKNAD1Q5T1N1 836 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 CLEC10AQ8IUN9 316 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 CEP95Q96GE4 821 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 NBPF3Q9H094 633 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 RPAP3Q9H6T3 665 aaPredicted RBP12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 GOPCQ9HD26 462 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 CTNNA3Q9UI47 895 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
GPATCH4-216ENST00000531900 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 ZNF213O14771 459 aa12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 PRKCZQ05513 592 aa12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 ZYXQ15942 572 aaKnown RBP12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 GMCL1P1Q8NEA9 526 aa12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 GPRC5AQ8NFJ5 357 aa12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 COA7Q96BR5 231 aa12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 TXNRD2Q9NNW7 524 aa12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
GPATCH4-216ENST00000531900 RBBP6Q7Z6E9 1792 aaKnown RBP12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 F5H6K3 240 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 CNMDO75829 334 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 DSG3P32926 999 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 ERVK-9P63128 1117 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 ERVK-24P63145 666 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 KLRC3Q07444 240 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 IRF5Q13568 498 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 Q3C1V9 767 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 FAM47AQ5JRC9 791 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 STK11IPQ8N1F8 1099 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 MB21D1Q8N884 522 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 TTC14Q96N46 770 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 INCENPQ9NQS7 918 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
GPATCH4-216ENST00000531900 TSPY2A6NKD2 308 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms