RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TATDN1Q6P1N9 297 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 DPP9Q86TI2 863 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 CLUAP1Q96AJ1 413 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 C12orf42Q96LP6 360 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 API5Q9BZZ5 524 aaKnown RBP10.99□□□□□ -0.65
USF1-210ENST00000531842 CCDC8Q9H0W5 538 aaPredicted RBP10.99□□□□□ -0.65
USF1-210ENST00000531842 ANTXR1Q9H6X2 564 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 IVNS1ABPQ9Y6Y0 642 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 FPGT-TNNI3KV9GXZ4 949 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 GRXCR1A8MXD5 290 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 KBTBD13C9JR72 458 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 BCAR3O75815 825 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 IDH1O75874 414 aaKnown RBP10.98□□□□□ -0.65
USF1-210ENST00000531842 PGK1P00558 417 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 UQCRFS1P1P0C7P4 283 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 CYP2D6P10635 497 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 ERCC3P19447 782 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 USP5P45974 858 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 CCNA1P78396 465 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 ABCB5Q2M3G0 1257 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
USF1-210ENST00000531842 TRMT2AQ8IZ69 625 aaKnown RBP10.98□□□□□ -0.65
USF1-210ENST00000531842 SLC44A5Q8NCS7 719 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 RNPC3Q96LT9 517 aaKnown RBP10.98□□□□□ -0.65
USF1-210ENST00000531842 KIAA1683Q9H0B3 1180 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 CHD7Q9P2D1 2997 aa10.98□□□□□ -0.65
USF1-210ENST00000531842 PQBP1O60828 265 aaKnown RBP10.97□□□□□ -0.65
USF1-210ENST00000531842 GLRX3O76003 335 aaKnown RBP10.97□□□□□ -0.65
USF1-210ENST00000531842 PGK2P07205 417 aa10.97□□□□□ -0.65
USF1-210ENST00000531842 GNAI3P08754 354 aa10.97□□□□□ -0.65
USF1-210ENST00000531842 PBX2P40425 430 aa10.97□□□□□ -0.65
USF1-210ENST00000531842 RARSP54136 660 aaKnown RBP10.97□□□□□ -0.65
USF1-210ENST00000531842 SMAD3P84022 425 aaKnown RBP10.97□□□□□ -0.65
USF1-210ENST00000531842 PLS1Q14651 629 aa10.97□□□□□ -0.65
USF1-210ENST00000531842 SNX17Q15036 470 aa10.97□□□□□ -0.65
USF1-210ENST00000531842 MAGEB6Q8N7X4 407 aa10.97□□□□□ -0.65
USF1-210ENST00000531842 GTF3C2Q8WUA4 911 aaPredicted RBP10.97□□□□□ -0.65
USF1-210ENST00000531842 TANGO6Q9C0B7 1094 aa10.97□□□□□ -0.65
USF1-210ENST00000531842 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
USF1-210ENST00000531842 DBNLQ9UJU6 430 aaKnown RBP10.97□□□□□ -0.65
USF1-210ENST00000531842 MPHOSPH10O00566 681 aaKnown RBP10.96□□□□□ -0.65
USF1-210ENST00000531842 SEPT4O43236 478 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 MSCO60682 206 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 TRIM27P14373 513 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 PLCG2P16885 1265 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 SLFNL1Q499Z3 407 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 LBX2Q6XYB7 198 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 NCAPG2Q86XI2 1143 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 SPICE1Q8N0Z3 855 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 ARRDC4Q8NCT1 418 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 ATG4CQ96DT6 458 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 SPATC1LQ9H0A9 340 aa10.96□□□□□ -0.65
USF1-210ENST00000531842 XIRP2A4UGR9 3374 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 RBAK-RBAKDNI3L0D1 243 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 GNAI2P04899 355 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 DNAJB2P25686 324 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 USP14P54578 494 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 OS9Q13438 667 aaPredicted RBP10.95□□□□□ -0.66
USF1-210ENST00000531842 CCDC85BQ15834 202 aaPredicted RBP10.95□□□□□ -0.66
USF1-210ENST00000531842 CCDC158Q5M9N0 1113 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 OLFML2BQ68BL8 750 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 FRAT1Q92837 279 aaPredicted RBP10.95□□□□□ -0.66
USF1-210ENST00000531842 DYNLL2Q96FJ2 89 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 MAML3Q96JK9 1138 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 PRDM12Q9H4Q4 367 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 GINM1Q9NU53 330 aa10.95□□□□□ -0.66
USF1-210ENST00000531842 A0A1W2PQ45 241 aaPredicted RBP10.94□□□□□ -0.66
USF1-210ENST00000531842 A0A1W2PQY0 241 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 MYADML2A6NDP7 307 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 CLTBP09497 229 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 RAG1P15918 1043 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 POLA2Q14181 598 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 COG2Q14746 738 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 SIAH1Q8IUQ4 282 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 EAF2Q96CJ1 260 aaPredicted RBP10.94□□□□□ -0.66
USF1-210ENST00000531842 NECAB3Q96P71 396 aaPredicted RBP10.94□□□□□ -0.66
USF1-210ENST00000531842 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.661e-13■■□□□ 11.9
USF1-210ENST00000531842 BCL11AQ9H165 835 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 ZNF576Q9H609 170 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 XPNPEP3Q9NQH7 507 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 FBXO28Q9NVF7 368 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 PHF24Q9UPV7 400 aa10.94□□□□□ -0.66
USF1-210ENST00000531842 CYP2D7A0A087X1C5 515 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 CCER2I3L3R5 266 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 TNFRSF10AO00220 468 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 SURF6O75683 361 aaKnown RBP10.93□□□□□ -0.66
USF1-210ENST00000531842 CHGBP05060 677 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 FPGSQ05932 587 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 FAAP100Q0VG06 881 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 TMEM132BQ14DG7 1078 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 TJAP1Q5JTD0 557 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 ATF7IPQ6VMQ6 1270 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 C16orf59Q7L2K0 433 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 MIER1Q8N108 512 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 TMEM57Q8N5G2 664 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 RIOK1Q9BRS2 568 aaKnown RBP10.93□□□□□ -0.66
USF1-210ENST00000531842 EHD4Q9H223 541 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms