RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PDZD8Q8NEN9 1154 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 KCNN1Q92952 543 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 DUSP9Q99956 384 aaKnown RBP7.05□□□□□ -1.28
USP47-211ENST00000531513 BCL2L13Q9BXK5 485 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 TLR6Q9Y2C9 796 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 PCDHA11Q9Y5I1 949 aa7.05□□□□□ -1.28
USP47-211ENST00000531513 PRRG2O14669 202 aa7.04□□□□□ -1.28
USP47-211ENST00000531513 LTKP29376 864 aa7.04□□□□□ -1.28
USP47-211ENST00000531513 EAPPQ56P03 285 aaPredicted RBP7.04□□□□□ -1.28
USP47-211ENST00000531513 JARID2Q92833 1246 aaPredicted RBP7.04□□□□□ -1.28
USP47-211ENST00000531513 MRRFQ96E11 262 aaKnown RBP7.04□□□□□ -1.28
USP47-211ENST00000531513 UPK3BL1B0FP48 263 aa7.03□□□□□ -1.28
USP47-211ENST00000531513 B8ZZF3 427 aa7.03□□□□□ -1.28
USP47-211ENST00000531513 UPK3BL2E5RIL1 263 aa7.03□□□□□ -1.28
USP47-211ENST00000531513 IRF2BP1Q8IU81 584 aa7.03□□□□□ -1.28
USP47-211ENST00000531513 LILRA2Q8N149 483 aa7.03□□□□□ -1.28
USP47-211ENST00000531513 FAM13CQ8NE31 585 aa7.03□□□□□ -1.28
USP47-211ENST00000531513 SLC6A17Q9H1V8 727 aa7.03□□□□□ -1.28
USP47-211ENST00000531513 KCNH3Q9ULD8 1083 aa7.03□□□□□ -1.28
USP47-211ENST00000531513 FITM1A5D6W6 292 aa7.02□□□□□ -1.29
USP47-211ENST00000531513 LRRN2O75325 713 aa7.02□□□□□ -1.29
USP47-211ENST00000531513 PLCG1P19174 1290 aa7.02□□□□□ -1.29
USP47-211ENST00000531513 OXR1Q8N573 874 aa7.02□□□□□ -1.29
USP47-211ENST00000531513 RNF141Q8WVD5 230 aa7.02□□□□□ -1.29
USP47-211ENST00000531513 MCOLN1Q9GZU1 580 aa7.02□□□□□ -1.29
USP47-211ENST00000531513 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
USP47-211ENST00000531513 YARSP54577 528 aaKnown RBP7.01□□□□□ -1.29
USP47-211ENST00000531513 ZNF605Q86T29 641 aa7.01□□□□□ -1.29
USP47-211ENST00000531513 PHC3Q8NDX5 983 aa7.01□□□□□ -1.29
USP47-211ENST00000531513 GIPC2Q8TF65 315 aa7.01□□□□□ -1.29
USP47-211ENST00000531513 INTS4Q96HW7 963 aaKnown RBP7.01□□□□□ -1.29
USP47-211ENST00000531513 MYOCOSA0A1B0GUC4 107 aa7□□□□□ -1.29
USP47-211ENST00000531513 RLBP1P12271 317 aa7□□□□□ -1.29
USP47-211ENST00000531513 BUD31P41223 144 aaPredicted RBP7□□□□□ -1.29
USP47-211ENST00000531513 NR0B2Q15466 257 aa7□□□□□ -1.29
USP47-211ENST00000531513 ZNF326Q5BKZ1 582 aaKnown RBP7□□□□□ -1.29
USP47-211ENST00000531513 TMEM201Q5SNT2 666 aa7□□□□□ -1.29
USP47-211ENST00000531513 BNC2Q6ZN30 1099 aaPredicted RBP7□□□□□ -1.29
USP47-211ENST00000531513 FBXO33Q7Z6M2 555 aa7□□□□□ -1.29
USP47-211ENST00000531513 DHX38Q92620 1227 aaKnown RBP7□□□□□ -1.29
USP47-211ENST00000531513 CWC22Q9HCG8 908 aaKnown RBP7□□□□□ -1.29
USP47-211ENST00000531513 YBX2Q9Y2T7 364 aaKnown RBP7□□□□□ -1.29
USP47-211ENST00000531513 SHISA3A0PJX4 238 aa6.99□□□□□ -1.29
USP47-211ENST00000531513 F6X3S4 739 aa6.99□□□□□ -1.29
USP47-211ENST00000531513 DLG4P78352 724 aa6.99□□□□□ -1.29
USP47-211ENST00000531513 DAB2P98082 770 aa6.99□□□□□ -1.29
USP47-211ENST00000531513 NOC4LQ9BVI4 516 aaKnown RBP6.99□□□□□ -1.29
USP47-211ENST00000531513 PARP2Q9UGN5 583 aa6.99□□□□□ -1.29
USP47-211ENST00000531513 PEX10O60683 326 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 SEMA7AO75326 666 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 CILPO75339 1184 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 BPNT1O95861 308 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 HOXA5P20719 270 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 TNNI2P48788 182 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 CTSWP56202 376 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 TEKQ02763 1124 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 CCDC84Q86UT8 332 aaPredicted RBP6.98□□□□□ -1.29
USP47-211ENST00000531513 SLFN12Q8IYM2 578 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 KREMEN1Q96MU8 473 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 EBF1Q9UH73 591 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 GPR160Q9UJ42 338 aa6.98□□□□□ -1.29
USP47-211ENST00000531513 FAM221AA4D161 298 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 ST13P50502 369 aaKnown RBP6.97□□□□□ -1.29
USP47-211ENST00000531513 GALK1P51570 392 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 CHRNEQ04844 493 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 TAF1CQ15572 869 aaPredicted RBP6.97□□□□□ -1.29
USP47-211ENST00000531513 DIEXFQ68CQ4 756 aaKnown RBP6.97□□□□□ -1.29
USP47-211ENST00000531513 KRTAP5-3Q6L8H2 238 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 TMC4Q7Z404 712 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 BAHD1Q8TBE0 780 aaPredicted RBP6.97□□□□□ -1.29
USP47-211ENST00000531513 SYTL4Q96C24 671 aaPredicted RBP6.97□□□□□ -1.29
USP47-211ENST00000531513 ASPNQ9BXN1 380 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 USP35Q9P2H5 1018 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 REV1Q9UBZ9 1251 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 KLHL3Q9UH77 587 aa6.97□□□□□ -1.29
USP47-211ENST00000531513 F13A1P00488 732 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 CTSHP09668 335 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 VAMP1P23763 118 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 PDE6BP35913 854 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 LMNB2Q03252 620 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 DUSP4Q13115 394 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 CAMK2GQ13555 558 aaPredicted RBP6.96□□□□□ -1.3
USP47-211ENST00000531513 ANKS4BQ8N8V4 417 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 SHISA4Q96DD7 197 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 C20orf173Q96LM9 149 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 ZNF552Q9H707 407 aaPredicted RBP6.96□□□□□ -1.3
USP47-211ENST00000531513 GCM1Q9NP62 436 aa6.96□□□□□ -1.3
USP47-211ENST00000531513 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 CHURC1-FNTBB4DL54 471 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 PSPNO60542 156 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 PSMD2Q13200 908 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 SPPL2CQ8IUH8 684 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 GATAD2BQ8WXI9 593 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 LINC01599Q8WXQ3 324 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 SGPP1Q9BX95 441 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 PARD6AQ9NPB6 346 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 POLR3KQ9Y2Y1 108 aaPredicted RBP6.95□□□□□ -1.3
USP47-211ENST00000531513 PRR36Q9H6K5 1346 aa6.95□□□□□ -1.3
USP47-211ENST00000531513 GRIN3BO60391 1043 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms