RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 APOA5Q6Q788 366 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 CHST3Q7LGC8 479 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 CATIPQ7Z7H3 387 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 SMARCC2Q8TAQ2 1214 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 HOOK2Q96ED9 719 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 LRRC2Q9BYS8 371 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 TDRD3Q9H7E2 651 aaKnown RBP11.52□□□□□ -0.57
CTNND1-228ENST00000531007 DDX4Q9NQI0 724 aaKnown RBP11.52□□□□□ -0.57
CTNND1-228ENST00000531007 RBM28Q9NW13 759 aaKnown RBP11.52□□□□□ -0.57
CTNND1-228ENST00000531007 ZNF70Q9UC06 446 aaPredicted RBP11.52□□□□□ -0.57
CTNND1-228ENST00000531007 SAP30BPQ9UHR5 308 aaKnown RBP11.52□□□□□ -0.57
CTNND1-228ENST00000531007 TNKSO95271 1327 aa11.52□□□□□ -0.57
CTNND1-228ENST00000531007 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
CTNND1-228ENST00000531007 GOLGA8BA8MQT2 603 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 WNT10BO00744 389 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 CPLX1O14810 134 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 RASA1P20936 1047 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 NOVP48745 357 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-228ENST00000531007 METAP2P50579 478 aaKnown RBP eCLIP11.51□□□□□ -0.57
CTNND1-228ENST00000531007 SCRN1Q12765 414 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 RAB3GAP1Q15042 981 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 CRACR2BQ8N4Y2 399 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-228ENST00000531007 ENAHQ8N8S7 591 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-228ENST00000531007 KIAA1468Q9P260 1216 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 FAM198AQ9UFP1 575 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 CNOT7Q9UIV1 285 aaKnown RBP11.51□□□□□ -0.57
CTNND1-228ENST00000531007 TACC3Q9Y6A5 838 aa11.51□□□□□ -0.57
CTNND1-228ENST00000531007 PRDM1O75626 825 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 LARGE1O95461 756 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 PTMSP20962 102 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 KIF5BP33176 963 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 GNAQP50148 359 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 PRELPP51888 382 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 NFIAQ12857 509 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 COL9A3Q14050 684 aaPredicted RBP11.5□□□□□ -0.57
CTNND1-228ENST00000531007 CLEC17AQ6ZS10 378 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 ZSCAN29Q8IWY8 852 aaPredicted RBP11.5□□□□□ -0.57
CTNND1-228ENST00000531007 ZNF654Q8IZM8 581 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 NECAB1Q8N987 351 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 FAM184AQ8NB25 1140 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 WASF1Q92558 559 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 DYNLL2Q96FJ2 89 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 INCENPQ9NQS7 918 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 GINM1Q9NU53 330 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 BRPF3Q9ULD4 1205 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 SYNPO2Q9UMS6 1093 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 ATP6V1DQ9Y5K8 247 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 PPP2R3BQ9Y5P8 575 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 SBF1O95248 1867 aa11.5□□□□□ -0.57
CTNND1-228ENST00000531007 GOLGA8AA7E2F4 631 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 GJB2P29033 226 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 LMOD1P29536 600 aaPredicted RBP11.49□□□□□ -0.57
CTNND1-228ENST00000531007 STK3Q13188 491 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 TATDN1Q6P1N9 297 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 LAPTM4BQ86VI4 370 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 APOBEC3FQ8IUX4 373 aaKnown RBP11.49□□□□□ -0.57
CTNND1-228ENST00000531007 GBP4Q96PP9 640 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 LZTS2Q9BRK4 669 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 KAT14Q9H8E8 782 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 GPRC5DQ9NZD1 345 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
CTNND1-228ENST00000531007 NAP1L2Q9ULW6 460 aaPredicted RBP11.49□□□□□ -0.57
CTNND1-228ENST00000531007 HPS5Q9UPZ3 1129 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 GJA3Q9Y6H8 435 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 STK36Q9NRP7 1315 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
CTNND1-228ENST00000531007 STX6O43752 255 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 BRD1O95696 1058 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 TOP1P11387 765 aaKnown RBP11.48□□□□□ -0.57
CTNND1-228ENST00000531007 IFNAR1P17181 557 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 MLLT3P42568 568 aaPredicted RBP11.48□□□□□ -0.57
CTNND1-228ENST00000531007 MAP3K10Q02779 954 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 ST3GAL1Q11201 340 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 TCP10Q12799 353 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 RTN1Q16799 776 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 KIF4BQ2VIQ3 1234 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 TRIM22Q8IYM9 498 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 FAM177A1Q8N128 213 aaPredicted RBP11.48□□□□□ -0.57
CTNND1-228ENST00000531007 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 NSUN7Q8NE18 718 aaKnown RBP11.48□□□□□ -0.57
CTNND1-228ENST00000531007 CTCFLQ8NI51 663 aaPredicted RBP11.48□□□□□ -0.57
CTNND1-228ENST00000531007 CSRNP1Q96S65 589 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 RNF181Q9P0P0 153 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 PITPNM2Q9BZ72 1349 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 ZNF541Q9H0D2 1346 aa11.48□□□□□ -0.57
CTNND1-228ENST00000531007 IGKV6D-41A0A0C4DH26 115 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 PTPDC1A2A3K4 754 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 DDTLA6NHG4 134 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-228ENST00000531007 TTLL1O95922 423 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 SYT1P21579 422 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 SHMT1P34896 483 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 TROAPQ12815 778 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-228ENST00000531007 FAM47AQ5JRC9 791 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 C9orf131Q5VYM1 1079 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 LARP1BQ659C4 914 aaKnown RBP11.47□□□□□ -0.57
CTNND1-228ENST00000531007 RCSD1Q6JBY9 416 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms