RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 NKX2-3Q8TAU0 364 aa14.07□□□□□ -0.16
LTBP3-219ENST00000530990 ERO1AQ96HE7 468 aa14.07□□□□□ -0.16
LTBP3-219ENST00000530990 RPAP3Q9H6T3 665 aaPredicted RBP14.07□□□□□ -0.16
LTBP3-219ENST00000530990 MTMR4Q9NYA4 1195 aa14.07□□□□□ -0.16
LTBP3-219ENST00000530990 NYAP2Q9P242 653 aa14.07□□□□□ -0.16
LTBP3-219ENST00000530990 CTNNA3Q9UI47 895 aa14.07□□□□□ -0.16
LTBP3-219ENST00000530990 ECM2O94769 699 aaPredicted RBP14.06□□□□□ -0.16
LTBP3-219ENST00000530990 PCP11498 1178 aaKnown RBP14.06□□□□□ -0.16
LTBP3-219ENST00000530990 HERVK_113P62684 666 aa14.06□□□□□ -0.16
LTBP3-219ENST00000530990 LACTBP83111 547 aaPredicted RBP14.06□□□□□ -0.16
LTBP3-219ENST00000530990 MFSD6Q6ZSS7 791 aa14.06□□□□□ -0.16
LTBP3-219ENST00000530990 CTU1Q7Z7A3 348 aaKnown RBP14.06□□□□□ -0.16
LTBP3-219ENST00000530990 LRRC47Q8N1G4 583 aaKnown RBP14.06□□□□□ -0.16
LTBP3-219ENST00000530990 ANKRD13CQ8N6S4 541 aa14.06□□□□□ -0.16
LTBP3-219ENST00000530990 LPAR1Q92633 364 aa14.06□□□□□ -0.16
LTBP3-219ENST00000530990 ARHGAP39Q9C0H5 1083 aa14.06□□□□□ -0.16
LTBP3-219ENST00000530990 RNF41Q9H4P4 317 aaPredicted RBP14.06□□□□□ -0.16
LTBP3-219ENST00000530990 CLIP2Q9UDT6 1046 aa14.06□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L15C9J2P7 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L13C9JLJ4 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L11C9JVI0 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L18D6R9N7 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L22D6RA61 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L17D6RBQ6 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L19D6RCP7 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L20D6RJB6 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 RAD21O60216 631 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 PEX10O60683 326 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 TTLL1O95922 423 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 CTGFP29279 349 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 USP17L24Q0WX57 530 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 FAM110CQ1W6H9 321 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 CATSPERGQ6ZRH7 1159 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 P2RX7Q99572 595 aaKnown RBP14.05□□□□□ -0.16
LTBP3-219ENST00000530990 TANGO6Q9C0B7 1094 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 LSG1Q9H089 658 aaKnown RBP14.05□□□□□ -0.16
LTBP3-219ENST00000530990 GOPCQ9HD26 462 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 IL17RBQ9NRM6 502 aa14.05□□□□□ -0.16
LTBP3-219ENST00000530990 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
LTBP3-219ENST00000530990 PLXNB2O15031 1838 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 DOCK3Q8IZD9 2030 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 WDR46O15213 610 aaKnown RBP14.04□□□□□ -0.16
LTBP3-219ENST00000530990 CYP21A2P08686 494 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 GCLCP48506 637 aaPredicted RBP14.04□□□□□ -0.16
LTBP3-219ENST00000530990 POTEEQ6S8J3 1075 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 CASC1Q6TDU7 716 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 OTOP1Q7RTM1 612 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 MAP4K1Q92918 833 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 MCOLN1Q9GZU1 580 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 STX8Q9UNK0 236 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 TRIM17Q9Y577 477 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 RBM8AQ9Y5S9 174 aaKnown RBP14.04□□□□□ -0.16
LTBP3-219ENST00000530990 TAF6LQ9Y6J9 622 aa14.04□□□□□ -0.16
LTBP3-219ENST00000530990 SPDYE16A6NNV3 312 aaPredicted RBP14.03□□□□□ -0.16
LTBP3-219ENST00000530990 B4E1Z4 1266 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 KDM4AO75164 1064 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 NDUFB10O96000 172 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 KIF22Q14807 665 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 FAM83BQ5T0W9 1011 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 KIAA1211Q6ZU35 1233 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 ESR2Q92731 530 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 MKL1Q969V6 931 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
LTBP3-219ENST00000530990 EFCC1Q9HA90 598 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 SYNPO2Q9UMS6 1093 aa14.03□□□□□ -0.16
LTBP3-219ENST00000530990 CCDC85CA6NKD9 419 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 F5H6K3 240 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 FLOT1O75955 427 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 PSMC4P43686 418 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 NOVP48745 357 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 KLRC3Q07444 240 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 GMCL1P1Q8NEA9 526 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 GTF3C2Q8WUA4 911 aaPredicted RBP14.02□□□□□ -0.17
LTBP3-219ENST00000530990 TRIM47Q96LD4 638 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 ZKSCAN3Q9BRR0 538 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 PAGR1Q9BTK6 254 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 TCP11L1Q9NUJ3 509 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 MORF4L1Q9UBU8 362 aa14.02□□□□□ -0.17
LTBP3-219ENST00000530990 HTTP42858 3142 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 CNMDO75829 334 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
LTBP3-219ENST00000530990 LBX2Q6XYB7 198 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 STOX1Q6ZVD7 989 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 ATG4CQ96DT6 458 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 KRT23Q9C075 422 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 CNNM2Q9H8M5 875 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 RBPJLQ9UBG7 517 aa14.01□□□□□ -0.17
LTBP3-219ENST00000530990 FMNL1O95466 1100 aaPredicted RBP14□□□□□ -0.17
LTBP3-219ENST00000530990 DSG3P32926 999 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 NT5C2P49902 561 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 FCGRTP55899 365 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 ERVK-9P63128 1117 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 ERVK-24P63145 666 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 COG2Q14746 738 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 SLFN13Q68D06 897 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 600.3 ms