RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 DCTN4Q9UJW0 460 aa10.25□□□□□ -0.77
CHKA-205ENST00000530730 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 TRIM37O94972 964 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 HNRNPUQ00839 825 aaKnown RBP eCLIP10.24□□□□□ -0.77
CHKA-205ENST00000530730 CYP27A1Q02318 531 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 TRIM26Q12899 539 aaPredicted RBP10.24□□□□□ -0.77
CHKA-205ENST00000530730 SEZ6L2Q6UXD5 910 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 FAM196AQ6ZSG2 479 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 DYMQ7RTS9 669 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 TMC7Q7Z402 723 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 EPS8L3Q8TE67 593 aaKnown RBP10.24□□□□□ -0.77
CHKA-205ENST00000530730 KRTAP4-12Q9BQ66 201 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 KRT82Q9NSB4 513 aa10.24□□□□□ -0.77
CHKA-205ENST00000530730 NFICP08651 508 aa10.23□□□□□ -0.77
CHKA-205ENST00000530730 FAAP100Q0VG06 881 aa10.23□□□□□ -0.77
CHKA-205ENST00000530730 DSC3Q14574 896 aa10.23□□□□□ -0.77
CHKA-205ENST00000530730 R3HDM1Q15032 1099 aaKnown RBP10.23□□□□□ -0.77
CHKA-205ENST00000530730 EZH2Q15910 746 aaKnown RBP10.23□□□□□ -0.77
CHKA-205ENST00000530730 SHISA5Q8N114 240 aa10.23□□□□□ -0.77
CHKA-205ENST00000530730 CAMKK2Q96RR4 588 aa10.23□□□□□ -0.77
CHKA-205ENST00000530730 AP4E1Q9UPM8 1137 aa10.23□□□□□ -0.77
CHKA-205ENST00000530730 GCP02774 474 aa10.22□□□□□ -0.77
CHKA-205ENST00000530730 ASPAP45381 313 aa10.22□□□□□ -0.77
CHKA-205ENST00000530730 PDE3AQ14432 1141 aa10.22□□□□□ -0.77
CHKA-205ENST00000530730 NLRP2Q9NX02 1062 aa10.22□□□□□ -0.77
CHKA-205ENST00000530730 PPP4R2Q9NY27 417 aa10.22□□□□□ -0.77
CHKA-205ENST00000530730 PAX4O43316 350 aa10.21□□□□□ -0.77
CHKA-205ENST00000530730 RAB6AP20340 208 aa10.21□□□□□ -0.77
CHKA-205ENST00000530730 VSIG10LQ86VR7 867 aa10.21□□□□□ -0.77
CHKA-205ENST00000530730 TCP11L2Q8N4U5 519 aa10.21□□□□□ -0.77
CHKA-205ENST00000530730 FMNL2Q96PY5 1086 aa10.21□□□□□ -0.77
CHKA-205ENST00000530730 PCGF6Q9BYE7 350 aa10.21□□□□□ -0.77
CHKA-205ENST00000530730 USP19O94966 1318 aa10.21□□□□□ -0.78
CHKA-205ENST00000530730 CENPJQ9HC77 1338 aaPredicted RBP10.21□□□□□ -0.78
CHKA-205ENST00000530730 ARHGEF28Q8N1W1 1705 aaKnown RBP10.21□□□□□ -0.78
CHKA-205ENST00000530730 CRYBG1Q9Y4K1 1723 aa10.21□□□□□ -0.78
CHKA-205ENST00000530730 DISP2A7MBM2 1401 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 TMPRSS2O15393 492 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 CYP26A1O43174 497 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 CPDO75976 1380 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 KIF4BQ2VIQ3 1234 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 DUSP27Q5VZP5 1158 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 DTHD1Q6ZMT9 781 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 SSH2Q76I76 1423 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 C1GALT1Q9NS00 363 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 CRIM1Q9NZV1 1036 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 CCDC39Q9UFE4 941 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 PPP1R9AQ9ULJ8 1098 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 THSD7AQ9UPZ6 1657 aa10.2□□□□□ -0.78
CHKA-205ENST00000530730 CAMTA1Q9Y6Y1 1673 aa10.19□□□□□ -0.78
CHKA-205ENST00000530730 PPIP5K1Q6PFW1 1433 aa10.19□□□□□ -0.78
CHKA-205ENST00000530730 FAM170BA6NMN3 283 aa10.19□□□□□ -0.78
CHKA-205ENST00000530730 TREHO43280 583 aa10.19□□□□□ -0.78
CHKA-205ENST00000530730 GSTP1P09211 210 aaKnown RBP10.19□□□□□ -0.78
CHKA-205ENST00000530730 PPP2R3AQ06190 1150 aa10.19□□□□□ -0.78
CHKA-205ENST00000530730 CCDC86Q9H6F5 360 aaKnown RBP10.19□□□□□ -0.78
CHKA-205ENST00000530730 TMEM39AQ9NV64 488 aa10.19□□□□□ -0.78
CHKA-205ENST00000530730 BSDC1Q9NW68 430 aaPredicted RBP10.19□□□□□ -0.78
CHKA-205ENST00000530730 ANGEL1Q9UNK9 670 aaKnown RBP10.19□□□□□ -0.78
CHKA-205ENST00000530730 THRAP3Q9Y2W1 955 aaKnown RBP10.19□□□□□ -0.78
CHKA-205ENST00000530730 SLFN14P0C7P3 912 aa10.18□□□□□ -0.78
CHKA-205ENST00000530730 TAL1P17542 331 aaPredicted RBP10.18□□□□□ -0.78
CHKA-205ENST00000530730 ENOX2Q16206 610 aaKnown RBP10.18□□□□□ -0.78
CHKA-205ENST00000530730 FBXL18Q96ME1 805 aa10.18□□□□□ -0.78
CHKA-205ENST00000530730 BCO2Q9BYV7 579 aa10.18□□□□□ -0.78
CHKA-205ENST00000530730 ATXN3LQ9H3M9 355 aa10.18□□□□□ -0.78
CHKA-205ENST00000530730 BIN2Q9UBW5 565 aaPredicted RBP10.18□□□□□ -0.78
CHKA-205ENST00000530730 ADGRE2Q9UHX3 823 aa10.18□□□□□ -0.78
CHKA-205ENST00000530730 PCDHGC5Q9Y5F6 944 aa10.18□□□□□ -0.78
CHKA-205ENST00000530730 ITSN1Q15811 1721 aa10.17□□□□□ -0.78
CHKA-205ENST00000530730 ZBTB7CA1YPR0 619 aa10.17□□□□□ -0.78
CHKA-205ENST00000530730 FCGRTP55899 365 aa10.17□□□□□ -0.78
CHKA-205ENST00000530730 OGFOD3Q6PK18 319 aa10.17□□□□□ -0.78
CHKA-205ENST00000530730 PDZD3Q86UT5 571 aa10.17□□□□□ -0.78
CHKA-205ENST00000530730 SIN3AQ96ST3 1273 aa10.17□□□□□ -0.78
CHKA-205ENST00000530730 BRD4O60885 1362 aaPredicted RBP10.16□□□□□ -0.78
CHKA-205ENST00000530730 PHRF1Q9P1Y6 1649 aaKnown RBP10.16□□□□□ -0.78
CHKA-205ENST00000530730 ZNF862O60290 1169 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 LIG1P18858 919 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 PLCB3Q01970 1234 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 ID3Q02535 119 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 ZNF765Q7L2R6 523 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 FBF1Q8TES7 1133 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 RGPD1P0DJD0 1748 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 KIAA1210Q9ULL0 1709 aa10.16□□□□□ -0.78
CHKA-205ENST00000530730 TOPAZ1Q8N9V7 1692 aa10.15□□□□□ -0.78
CHKA-205ENST00000530730 AATKQ6ZMQ8 1374 aa10.15□□□□□ -0.78
CHKA-205ENST00000530730 PARD3Q8TEW0 1356 aa10.15□□□□□ -0.78
CHKA-205ENST00000530730 LRP5O75197 1615 aa10.15□□□□□ -0.78
CHKA-205ENST00000530730 EVC2Q86UK5 1308 aa10.15□□□□□ -0.78
CHKA-205ENST00000530730 PI16Q6UXB8 463 aa10.15□□□□□ -0.78
CHKA-205ENST00000530730 WDR89Q96FK6 387 aaPredicted RBP10.15□□□□□ -0.78
CHKA-205ENST00000530730 FANCD2OSQ96PS1 177 aa10.15□□□□□ -0.78
CHKA-205ENST00000530730 GPN3Q9UHW5 284 aaPredicted RBP10.15□□□□□ -0.78
CHKA-205ENST00000530730 DAGLAQ9Y4D2 1042 aa10.15□□□□□ -0.78
CHKA-205ENST00000530730 USP6P35125 1406 aa10.15□□□□□ -0.79
CHKA-205ENST00000530730 NRKQ7Z2Y5 1582 aa10.14□□□□□ -0.79
CHKA-205ENST00000530730 PNMA6FA0A0J9YX94 578 aa10.14□□□□□ -0.79
CHKA-205ENST00000530730 DYNC1LI2O43237 492 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms