RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 GH2P01242 217 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 IFIT1BQ5T764 474 aaKnown RBP16.79■□□□□ 0.28
TTC39A-216ENST00000530004 CCDC144CPQ8IYA2 1237 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 ANKRD13AQ8IZ07 590 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 SCYL3Q8IZE3 742 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 NEDD1Q8NHV4 660 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.79■□□□□ 0.28
TTC39A-216ENST00000530004 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 ZBTB21Q9ULJ3 1066 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 ASNSP08243 561 aa16.78■□□□□ 0.28
TTC39A-216ENST00000530004 ADD1P35611 737 aaKnown RBP16.78■□□□□ 0.28
TTC39A-216ENST00000530004 NOL9Q5SY16 702 aaKnown RBP16.78■□□□□ 0.28
TTC39A-216ENST00000530004 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
TTC39A-216ENST00000530004 TMEM179Q6ZVK1 233 aa16.78■□□□□ 0.28
TTC39A-216ENST00000530004 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
TTC39A-216ENST00000530004 GINM1Q9NU53 330 aa16.78■□□□□ 0.28
TTC39A-216ENST00000530004 KIF3AQ9Y496 699 aa16.78■□□□□ 0.28
TTC39A-216ENST00000530004 PLIN4Q96Q06 1357 aa16.78■□□□□ 0.28
TTC39A-216ENST00000530004 UBE2Q2LH0YL09 131 aa16.77■□□□□ 0.28
TTC39A-216ENST00000530004 NMT2O60551 498 aa16.77■□□□□ 0.28
TTC39A-216ENST00000530004 F13A1P00488 732 aa16.77■□□□□ 0.28
TTC39A-216ENST00000530004 CDC27P30260 824 aa16.77■□□□□ 0.28
TTC39A-216ENST00000530004 GUCY1A2P33402 732 aa16.77■□□□□ 0.28
TTC39A-216ENST00000530004 VGLL4Q14135 290 aa16.77■□□□□ 0.28
TTC39A-216ENST00000530004 CSADQ9Y600 493 aa16.77■□□□□ 0.28
TTC39A-216ENST00000530004 NID2Q14112 1375 aa16.77■□□□□ 0.28
TTC39A-216ENST00000530004 PAPPA2Q9BXP8 1791 aa16.77■□□□□ 0.27
TTC39A-216ENST00000530004 SEPT2Q15019 361 aa16.77■□□□□ 0.27
TTC39A-216ENST00000530004 MCTP1Q6DN14 999 aa16.77■□□□□ 0.27
TTC39A-216ENST00000530004 CPLX2Q6PUV4 134 aaKnown RBP16.77■□□□□ 0.27
TTC39A-216ENST00000530004 CHAMP1Q96JM3 812 aa16.77■□□□□ 0.27
TTC39A-216ENST00000530004 IL17RBQ9NRM6 502 aa16.77■□□□□ 0.27
TTC39A-216ENST00000530004 TCP11L1Q9NUJ3 509 aa16.77■□□□□ 0.27
TTC39A-216ENST00000530004 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.77■□□□□ 0.27
TTC39A-216ENST00000530004 IGKV6D-41A0A0C4DH26 115 aa16.76■□□□□ 0.27
TTC39A-216ENST00000530004 UNCXA6NJT0 531 aa16.76■□□□□ 0.27
TTC39A-216ENST00000530004 GOLGA6L22H0YM25 854 aa16.76■□□□□ 0.27
TTC39A-216ENST00000530004 CDKL5O76039 1030 aa16.76■□□□□ 0.27
TTC39A-216ENST00000530004 FDPSP14324 419 aaKnown RBP16.76■□□□□ 0.27
TTC39A-216ENST00000530004 RCAN1P53805 252 aa16.76■□□□□ 0.27
TTC39A-216ENST00000530004 RTN1Q16799 776 aa16.76■□□□□ 0.27
TTC39A-216ENST00000530004 FOXD4L6Q3SYB3 417 aaPredicted RBP16.76■□□□□ 0.27
TTC39A-216ENST00000530004 FOXD4L3Q6VB84 417 aaPredicted RBP16.76■□□□□ 0.27
TTC39A-216ENST00000530004 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
TTC39A-216ENST00000530004 FAM217BQ9NTX9 383 aaPredicted RBP16.76■□□□□ 0.27
TTC39A-216ENST00000530004 SNCAIPQ9Y6H5 919 aa16.76■□□□□ 0.27
TTC39A-216ENST00000530004 H3BQV1 296 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 PTPRAP18433 802 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 IFFO2Q5TF58 517 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 CATIPQ7Z7H3 387 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 CLEC10AQ8IUN9 316 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 CEP95Q96GE4 821 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 CLMNQ96JQ2 1002 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 PICK1Q9NRD5 415 aa16.75■□□□□ 0.27
TTC39A-216ENST00000530004 ORC3Q9UBD5 711 aaPredicted RBP16.75■□□□□ 0.27
TTC39A-216ENST00000530004 TMEM88BA6NKF7 163 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 ICA1Q05084 483 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 SAPCD2Q86UD0 394 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 CCDC84Q86UT8 332 aaPredicted RBP16.74■□□□□ 0.27
TTC39A-216ENST00000530004 MTMR4Q9NYA4 1195 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 NOVP48745 357 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 FOSBP53539 338 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 HUNKP57058 714 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 NTRK3Q16288 839 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 CCDC178Q5BJE1 867 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 FANCBQ8NB91 859 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 ELP3Q9H9T3 547 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 ATP6V1DQ9Y5K8 247 aa16.74■□□□□ 0.27
TTC39A-216ENST00000530004 CCDC196A0A1B0GTZ2 297 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 PTMSP20962 102 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 RCSD1Q6JBY9 416 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 FERMT3Q86UX7 667 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 DGKHQ86XP1 1220 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 SIAH1Q8IUQ4 282 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 PHKBQ93100 1093 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 TRPM7Q96QT4 1865 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 STX8Q9UNK0 236 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 TLL2Q9Y6L7 1015 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 MYH8P13535 1937 aa16.73■□□□□ 0.27
TTC39A-216ENST00000530004 GREB1LQ9C091 1923 aaPredicted RBP16.72■□□□□ 0.27
TTC39A-216ENST00000530004 DDAH1O94760 285 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 TTLL1O95922 423 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 CALM1P0DP23 149 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 CALM2P0DP24 149 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 CALM3P0DP25 149 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 EEF2P13639 858 aaKnown RBP16.72■□□□□ 0.27
TTC39A-216ENST00000530004 TROAPQ12815 778 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 PPP4R3BQ5MIZ7 849 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 ERO1BQ86YB8 467 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
TTC39A-216ENST00000530004 NYAP2Q9P242 653 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 ZHX2Q9Y6X8 837 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 OTOFQ9HC10 1997 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 SPDYE5A6NIY4 337 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 APLP1P51693 650 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 ANKS1AQ92625 1134 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms