RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 SPATC1LQ9H0A9 340 aa19.52■□□□□ 0.72
COL16A1-216ENST00000529928 ANTXR1Q9H6X2 564 aa19.52■□□□□ 0.72
COL16A1-216ENST00000529928 SLC5A4Q9NY91 659 aa19.52■□□□□ 0.72
COL16A1-216ENST00000529928 SEPT4O43236 478 aa19.51■□□□□ 0.71
COL16A1-216ENST00000529928 GABPAQ06546 454 aa19.51■□□□□ 0.71
COL16A1-216ENST00000529928 DIEXFQ68CQ4 756 aaKnown RBP19.51■□□□□ 0.71
COL16A1-216ENST00000529928 SLC39A5Q6ZMH5 540 aa19.51■□□□□ 0.71
COL16A1-216ENST00000529928 MB21D1Q8N884 522 aa19.51■□□□□ 0.71
COL16A1-216ENST00000529928 DNAH12Q6ZR08 3092 aa19.51■□□□□ 0.71
COL16A1-216ENST00000529928 RLFQ13129 1914 aa19.51■□□□□ 0.71
COL16A1-216ENST00000529928 MAGEB6P1A0A0J9YX57 407 aa19.5■□□□□ 0.71
COL16A1-216ENST00000529928 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
COL16A1-216ENST00000529928 SNX17Q15036 470 aa19.5■□□□□ 0.71
COL16A1-216ENST00000529928 MIER1Q8N108 512 aa19.5■□□□□ 0.71
COL16A1-216ENST00000529928 CRNKL1Q9BZJ0 848 aaKnown RBP19.5■□□□□ 0.71
COL16A1-216ENST00000529928 MROH8Q9H579 483 aa19.5■□□□□ 0.71
COL16A1-216ENST00000529928 PRDM5Q9NQX1 630 aaPredicted RBP19.5■□□□□ 0.71
COL16A1-216ENST00000529928 A0A0G2JMZ2 1700 aa19.49■□□□□ 0.71
COL16A1-216ENST00000529928 A0A1W2PRG0 241 aa19.49■□□□□ 0.71
COL16A1-216ENST00000529928 ERCC3P19447 782 aa19.49■□□□□ 0.71
COL16A1-216ENST00000529928 TTF1Q15361 905 aaPredicted RBP19.49■□□□□ 0.71
COL16A1-216ENST00000529928 SHHQ15465 462 aa19.49■□□□□ 0.71
COL16A1-216ENST00000529928 FTSJ3Q8IY81 847 aaKnown RBP19.49■□□□□ 0.71
COL16A1-216ENST00000529928 ABRAQ8N0Z2 381 aa19.49■□□□□ 0.71
COL16A1-216ENST00000529928 MCM9Q9NXL9 1143 aa19.49■□□□□ 0.71
COL16A1-216ENST00000529928 NAV1Q8NEY1 1877 aa19.49■□□□□ 0.71
COL16A1-216ENST00000529928 COBLO75128 1261 aa19.48■□□□□ 0.71
COL16A1-216ENST00000529928 ANO1Q5XXA6 986 aa19.48■□□□□ 0.71
COL16A1-216ENST00000529928 AACSQ86V21 672 aa19.48■□□□□ 0.71
COL16A1-216ENST00000529928 ERC1Q8IUD2 1116 aa19.48■□□□□ 0.71
COL16A1-216ENST00000529928 ITPRIPQ8IWB1 547 aa19.48■□□□□ 0.71
COL16A1-216ENST00000529928 CDX2Q99626 313 aaPredicted RBP19.48■□□□□ 0.71
COL16A1-216ENST00000529928 MYCNP04198 464 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-216ENST00000529928 PLS1Q14651 629 aa19.47■□□□□ 0.71
COL16A1-216ENST00000529928 TRIM60Q495X7 471 aa19.47■□□□□ 0.71
COL16A1-216ENST00000529928 C9orf50Q5SZB4 431 aa19.47■□□□□ 0.71
COL16A1-216ENST00000529928 SLC9C2Q5TAH2 1124 aa19.47■□□□□ 0.71
COL16A1-216ENST00000529928 C1orf53Q5VUE5 145 aa19.47■□□□□ 0.71
COL16A1-216ENST00000529928 TMEM179Q6ZVK1 233 aa19.47■□□□□ 0.71
COL16A1-216ENST00000529928 BADQ92934 168 aa19.47■□□□□ 0.71
COL16A1-216ENST00000529928 PDLIM7Q9NR12 457 aa19.47■□□□□ 0.71
COL16A1-216ENST00000529928 DSG3P32926 999 aa19.46■□□□□ 0.71
COL16A1-216ENST00000529928 ADCYAP1R1P41586 468 aa19.46■□□□□ 0.71
COL16A1-216ENST00000529928 SMAD3P84022 425 aaKnown RBP19.46■□□□□ 0.71
COL16A1-216ENST00000529928 LRRC41Q15345 812 aa19.46■□□□□ 0.71
COL16A1-216ENST00000529928 NCAPG2Q86XI2 1143 aa19.46■□□□□ 0.71
COL16A1-216ENST00000529928 MAML3Q96JK9 1138 aa19.46■□□□□ 0.71
COL16A1-216ENST00000529928 SEMA6BQ9H3T3 888 aa19.46■□□□□ 0.71
COL16A1-216ENST00000529928 SH2D4AQ9H788 454 aa19.46■□□□□ 0.71
COL16A1-216ENST00000529928 SWAP70Q9UH65 585 aa19.46■□□□□ 0.71
COL16A1-216ENST00000529928 LAMA2P24043 3122 aaKnown RBP19.46■□□□□ 0.71
COL16A1-216ENST00000529928 FLOT1O75955 427 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 FCER1AP12319 257 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 PDE6AP16499 860 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 FAM47AQ5JRC9 791 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 PRAMEF19Q5SWL8 479 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 CEP85Q6P2H3 762 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 MAFAQ8NHW3 353 aaPredicted RBP19.45■□□□□ 0.7
COL16A1-216ENST00000529928 ARHGEF10LQ9HCE6 1279 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 DCP1AQ9NPI6 582 aaPredicted RBP19.45■□□□□ 0.7
COL16A1-216ENST00000529928 NRBP1Q9UHY1 535 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 EXOC6BQ9Y2D4 811 aa19.45■□□□□ 0.7
COL16A1-216ENST00000529928 EVX2Q03828 476 aa19.44■□□□□ 0.7
COL16A1-216ENST00000529928 KIAA1755Q5JYT7 1200 aa19.44■□□□□ 0.7
COL16A1-216ENST00000529928 SDR42E1Q8WUS8 393 aa19.44■□□□□ 0.7
COL16A1-216ENST00000529928 FERMT2Q96AC1 680 aa19.44■□□□□ 0.7
COL16A1-216ENST00000529928 TMX2Q9Y320 296 aa19.44■□□□□ 0.7
COL16A1-216ENST00000529928 ZNF532Q9HCE3 1301 aa19.44■□□□□ 0.7
COL16A1-216ENST00000529928 TRIM43BA6NCK2 446 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 SLC25A27O95847 323 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 ICA1Q05084 483 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 SH3RF1Q7Z6J0 888 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 TRIM43Q96BQ3 446 aaPredicted RBP19.43■□□□□ 0.7
COL16A1-216ENST00000529928 ATG4CQ96DT6 458 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 VCPKMTQ9H867 229 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 PHF24Q9UPV7 400 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 TACC3Q9Y6A5 838 aa19.43■□□□□ 0.7
COL16A1-216ENST00000529928 WDR46O15213 610 aaKnown RBP19.42■□□□□ 0.7
COL16A1-216ENST00000529928 RARBP10826 455 aa19.42■□□□□ 0.7
COL16A1-216ENST00000529928 RLBP1P12271 317 aa19.42■□□□□ 0.7
COL16A1-216ENST00000529928 TLE2Q04725 743 aa19.42■□□□□ 0.7
COL16A1-216ENST00000529928 SPICE1Q8N0Z3 855 aa19.42■□□□□ 0.7
COL16A1-216ENST00000529928 LCORLQ8N3X6 602 aa19.42■□□□□ 0.7
COL16A1-216ENST00000529928 SLC44A5Q8NCS7 719 aa19.42■□□□□ 0.7
COL16A1-216ENST00000529928 XPNPEP3Q9NQH7 507 aa19.42■□□□□ 0.7
COL16A1-216ENST00000529928 TMEM265A0A087WTH1 108 aa19.41■□□□□ 0.7
COL16A1-216ENST00000529928 TCRBV5S4A2TA0A5A2 114 aa19.41■□□□□ 0.7
COL16A1-216ENST00000529928 RNF180Q86T96 592 aa19.41■□□□□ 0.7
COL16A1-216ENST00000529928 SIAH1Q8IUQ4 282 aa19.41■□□□□ 0.7
COL16A1-216ENST00000529928 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.41■□□□□ 0.7
COL16A1-216ENST00000529928 MYLIPQ8WY64 445 aa19.41■□□□□ 0.7
COL16A1-216ENST00000529928 CCDC17Q96LX7 622 aa19.41■□□□□ 0.7
COL16A1-216ENST00000529928 TTYH1Q9H313 450 aaPredicted RBP19.41■□□□□ 0.7
COL16A1-216ENST00000529928 IL1RAPL2Q9NP60 686 aa19.41■□□□□ 0.7
COL16A1-216ENST00000529928 GOLIM4O00461 696 aa19.4■□□□□ 0.7
COL16A1-216ENST00000529928 CLTBP09497 229 aa19.4■□□□□ 0.7
COL16A1-216ENST00000529928 CYP2D6P10635 497 aa19.4■□□□□ 0.7
COL16A1-216ENST00000529928 AKR1B1P15121 316 aa19.4■□□□□ 0.7
COL16A1-216ENST00000529928 TMEM132BQ14DG7 1078 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms