RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 ZSWIM8A7E2V4 1837 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 RAD50Q92878 1312 aa19.15■□□□□ 0.66
TSPAN4-218ENST00000529566 SGSM2O43147 1006 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 PEX10O60683 326 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 PSMC4P43686 418 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 FAM110CQ1W6H9 321 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 FBXO46Q6PJ61 603 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 TBC1D10CQ8IV04 446 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 NKX2-3Q8TAU0 364 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 SH2D4AQ9H788 454 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 TXNRD2Q9NNW7 524 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 IL17RBQ9NRM6 502 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 PPP4R2Q9NY27 417 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 MORF4L1Q9UBU8 362 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 PTPN22Q9Y2R2 807 aa19.14■□□□□ 0.65
TSPAN4-218ENST00000529566 TSPY3P0CV98 308 aa19.13■□□□□ 0.65
TSPAN4-218ENST00000529566 TSPY8P0CW00 308 aa19.13■□□□□ 0.65
TSPAN4-218ENST00000529566 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
TSPAN4-218ENST00000529566 KIF22Q14807 665 aa19.13■□□□□ 0.65
TSPAN4-218ENST00000529566 IFFO2Q5TF58 517 aa19.13■□□□□ 0.65
TSPAN4-218ENST00000529566 SPICE1Q8N0Z3 855 aa19.13■□□□□ 0.65
TSPAN4-218ENST00000529566 RUFY2Q8WXA3 655 aa19.13■□□□□ 0.65
TSPAN4-218ENST00000529566 CLIP2Q9UDT6 1046 aa19.13■□□□□ 0.65
TSPAN4-218ENST00000529566 CNMDO75829 334 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 GNRH1P01148 92 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 NOVP48745 357 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 PTH1RQ03431 593 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 ARHGEF6Q15052 776 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 AKNAD1Q5T1N1 836 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 LBX2Q6XYB7 198 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 STAG1Q8WVM7 1258 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 HPS5Q9UPZ3 1129 aa19.12■□□□□ 0.65
TSPAN4-218ENST00000529566 SPDYE16A6NNV3 312 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 ZNF213O14771 459 aa19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 NMT2O60551 498 aa19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 ECM2O94769 699 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 TTLL1O95922 423 aa19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 Q3C1V9 767 aa19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 GOPCQ9HD26 462 aa19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 SYNPO2Q9UMS6 1093 aa19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 RLFQ13129 1914 aa19.11■□□□□ 0.65
TSPAN4-218ENST00000529566 TSPY2A6NKD2 308 aa19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 F5H6K3 240 aa19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 WDR46O15213 610 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 RANBP6O60518 1105 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 FMNL1O95466 1100 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 PCP11498 1178 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 KLRC3Q07444 240 aa19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 COG2Q14746 738 aa19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 GPRC5AQ8NFJ5 357 aa19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 GTF3C2Q8WUA4 911 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 SRRDQ9UH36 339 aa19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 CTNNA3Q9UI47 895 aa19.1■□□□□ 0.65
TSPAN4-218ENST00000529566 NEDD4P46934 1319 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 NDUFB10O96000 172 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 FCGRTP55899 365 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 MFSD6Q6ZSS7 791 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 TANGO6Q9C0B7 1094 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 TCP11L1Q9NUJ3 509 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 HOXC10Q9NYD6 342 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 RABGAP1Q9Y3P9 1069 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 PTCH2Q9Y6C5 1203 aa19.09■□□□□ 0.65
TSPAN4-218ENST00000529566 CENPFP49454 3210 aa19.08■□□□□ 0.65
TSPAN4-218ENST00000529566 DSG3P32926 999 aa19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 ERVK-9P63128 1117 aa19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 ERVK-24P63145 666 aa19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 RRP12Q5JTH9 1297 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 GMCL1P1Q8NEA9 526 aa19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 MAP4K1Q92918 833 aa19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 RNF41Q9H4P4 317 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 BTBD7Q9P203 1132 aa19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 ADAMTS5Q9UNA0 930 aa19.08■□□□□ 0.64
TSPAN4-218ENST00000529566 MGAMO43451 1857 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 LAMA4Q16363 1823 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 DOCK3Q8IZD9 2030 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 PRMT2P55345 433 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 IMMTQ16891 758 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 FAM83BQ5T0W9 1011 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 LRRC47Q8N1G4 583 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 NUP88Q99567 741 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 ESYT1Q9BSJ8 1104 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 PAGR1Q9BTK6 254 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 TOMM22Q9NS69 142 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 FBXO28Q9NVF7 368 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 GABRQQ9UN88 632 aa19.07■□□□□ 0.64
TSPAN4-218ENST00000529566 MYPNQ86TC9 1320 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 MYH4Q9Y623 1939 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 FLOT1O75955 427 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 HOXD10P28358 340 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 PRKCZQ05513 592 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 PPP4R3BQ5MIZ7 849 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 RCSD1Q6JBY9 416 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 LSG1Q9H089 658 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 PORCNQ9H237 461 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 GJD2Q9UKL4 321 aa19.06■□□□□ 0.64
TSPAN4-218ENST00000529566 TNPO2O14787 897 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-218ENST00000529566 CYP21A2P08686 494 aa19.05■□□□□ 0.64
TSPAN4-218ENST00000529566 ARMC5Q96C12 935 aa19.05■□□□□ 0.64
TSPAN4-218ENST00000529566 ATG4CQ96DT6 458 aa19.05■□□□□ 0.64
TSPAN4-218ENST00000529566 STX8Q9UNK0 236 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms