RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 UQCRFS1P1P0C7P4 283 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 FAAP100Q0VG06 881 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 FAM47AQ5JRC9 791 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 PRAMEF19Q5SWL8 479 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 NAA16Q6N069 864 aaPredicted RBP14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 MFSD5Q6N075 450 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 SSH1Q8WYL5 1049 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 NEUROD6Q96NK8 337 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.29□□□□□ -0.123e-6■□□□□ 10.1
AMBRA1-207ENST00000529553 PBX4Q9BYU1 374 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 PRDM12Q9H4Q4 367 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 HCN4Q9Y3Q4 1203 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 NCOR1O75376 2440 aa14.29□□□□□ -0.12
AMBRA1-207ENST00000529553 PQBP1O60828 265 aaKnown RBP14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 BMP1P13497 986 aa14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 PPIGQ13427 754 aaKnown RBP eCLIP14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 ZYXQ15942 572 aaKnown RBP14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 AAK1Q2M2I8 961 aa14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 PI16Q6UXB8 463 aa14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 MB21D1Q8N884 522 aa14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 MAML3Q96JK9 1138 aa14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 SPATC1LQ9H0A9 340 aa14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 RPAP3Q9H6T3 665 aaPredicted RBP14.28□□□□□ -0.12
AMBRA1-207ENST00000529553 A0A1W2PQ45 241 aaPredicted RBP14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 A0A1W2PQY0 241 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 ERCC3P19447 782 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 ADGRE1Q14246 886 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 RAB3GAP1Q15042 981 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 RAB30Q15771 203 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 TMEM240Q5SV17 173 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 CCDC129Q6ZRS4 1044 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 EHD4Q9H223 541 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 CABP5Q9NP86 173 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 MSRAQ9UJ68 235 aa14.27□□□□□ -0.13
AMBRA1-207ENST00000529553 IGFBP4P22692 258 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 PBX2P40425 430 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 MCAMP43121 646 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 ABCB5Q2M3G0 1257 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 CERKLQ49MI3 558 aaPredicted RBP14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 CERS3Q8IU89 383 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 ACER1Q8TDN7 264 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 LRFN3Q9BTN0 628 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 SERPINB13Q9UIV8 391 aa14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
AMBRA1-207ENST00000529553 MOXD2PA6NHM9 499 aa14.25□□□□□ -0.13
AMBRA1-207ENST00000529553 FCER1AP12319 257 aa14.25□□□□□ -0.13
AMBRA1-207ENST00000529553 TTC6Q86TZ1 520 aa14.25□□□□□ -0.13
AMBRA1-207ENST00000529553 TMEM199Q8N511 208 aa14.25□□□□□ -0.13
AMBRA1-207ENST00000529553 STARD7Q9NQZ5 370 aa14.25□□□□□ -0.13
AMBRA1-207ENST00000529553 SAP30BPQ9UHR5 308 aaKnown RBP14.25□□□□□ -0.13
AMBRA1-207ENST00000529553 TBX21Q9UL17 535 aa14.25□□□□□ -0.13
AMBRA1-207ENST00000529553 ROBO3Q96MS0 1386 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 ELP1O95163 1332 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 MROH7Q68CQ1 1323 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 GRXCR1A8MXD5 290 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 SLC25A27O95847 323 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 PGK1P00558 417 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 ACLYP53396 1101 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 MTX1Q13505 466 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 PSRC1Q6PGN9 363 aaPredicted RBP14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 HERVK_113Q902F9 699 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 TINF2Q9BSI4 451 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 SLC28A3Q9HAS3 691 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 MRS2Q9HD23 443 aa14.24□□□□□ -0.13
AMBRA1-207ENST00000529553 ZNF236Q9UL36 1845 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 SRGAP3O43295 1099 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 ADAMTS4O75173 837 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 AKR1A1P14550 325 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 DSG3P32926 999 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 CDK7P50613 346 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 TMEM31Q5JXX7 168 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 ADGRA1Q86SQ6 560 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 NCAPG2Q86XI2 1143 aa14.23□□□□□ -0.13
AMBRA1-207ENST00000529553 SIPA1L1O43166 1804 aa14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 ERC2O15083 957 aa14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 ZNF865P0CJ78 1059 aaPredicted RBP14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 TMED8Q6PL24 325 aaPredicted RBP14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 ZNF365Q70YC5 407 aa14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 KLHDC9Q8NEP7 349 aa14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 MTIF3Q9H2K0 278 aaKnown RBP14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.22□□□□□ -0.13
AMBRA1-207ENST00000529553 GPR37L1O60883 481 aa14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 CYP2E1P05181 493 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 CSF2RAP15509 400 aa14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 POU3F3P20264 500 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 GUCY1A2P33402 732 aa14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 KCNA10Q16322 511 aa14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 ZNF792Q3KQV3 632 aa14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 CCDC158Q5M9N0 1113 aa14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 CCSAPQ6IQ19 270 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 MSL3Q8N5Y2 521 aaKnown RBP14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 ZNF512BQ96KM6 892 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 NECAB3Q96P71 396 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-207ENST00000529553 TANGO6Q9C0B7 1094 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms