RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 Q8N3U1 123 aa7.72□□□□□ -1.17
NUP98-216ENST00000529379 COX4I2Q96KJ9 171 aa7.72□□□□□ -1.17
NUP98-216ENST00000529379 FBXL18Q96ME1 805 aa7.72□□□□□ -1.17
NUP98-216ENST00000529379 ASPNQ9BXN1 380 aa7.72□□□□□ -1.17
NUP98-216ENST00000529379 MKNK2Q9HBH9 465 aa7.72□□□□□ -1.17
NUP98-216ENST00000529379 ZNF214Q9UL59 606 aaPredicted RBP7.72□□□□□ -1.17
NUP98-216ENST00000529379 PCDHB10Q9UN67 800 aa7.72□□□□□ -1.17
NUP98-216ENST00000529379 PLAGL2Q9UPG8 496 aa7.72□□□□□ -1.17
NUP98-216ENST00000529379 CEACAM5P06731 702 aa7.71□□□□□ -1.18
NUP98-216ENST00000529379 ITIH2P19823 946 aa7.71□□□□□ -1.18
NUP98-216ENST00000529379 KIR3DL1P43629 444 aa7.71□□□□□ -1.18
NUP98-216ENST00000529379 ARHGAP27Q6ZUM4 889 aa7.71□□□□□ -1.18
NUP98-216ENST00000529379 PLD6Q8N2A8 252 aaKnown RBP7.71□□□□□ -1.18
NUP98-216ENST00000529379 MFSD4AQ8N468 514 aa7.71□□□□□ -1.18
NUP98-216ENST00000529379 DHRS1Q96LJ7 313 aa7.71□□□□□ -1.18
NUP98-216ENST00000529379 RNF112Q9ULX5 631 aa7.71□□□□□ -1.18
NUP98-216ENST00000529379 CAPN6Q9Y6Q1 641 aa7.71□□□□□ -1.18
NUP98-216ENST00000529379 GNAT3A8MTJ3 354 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 RNF4P78317 190 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 TNK2Q07912 1038 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 NKPD1Q17RQ9 610 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 ZMYM1Q5SVZ6 1142 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 XP32Q5T750 250 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 LARP1BQ659C4 914 aaKnown RBP7.7□□□□□ -1.18
NUP98-216ENST00000529379 SPACA3Q8IXA5 215 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 CKAP2LQ8IYA6 745 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 CELF2-AS1Q8N7Q2 184 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 MICAL1Q8TDZ2 1067 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 KLHL6Q8WZ60 621 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 UBXN4Q92575 508 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 DNAJC2Q99543 621 aaKnown RBP7.7□□□□□ -1.18
NUP98-216ENST00000529379 HIRIP3Q9BW71 556 aaPredicted RBP7.7□□□□□ -1.18
NUP98-216ENST00000529379 PHAXQ9H814 394 aaKnown RBP7.7□□□□□ -1.18
NUP98-216ENST00000529379 FAM86C1Q9NVL1 165 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 USP35Q9P2H5 1018 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 R3HCC1Q9Y3T6 440 aaKnown RBP7.7□□□□□ -1.18
NUP98-216ENST00000529379 CCDC180Q9P1Z9 1646 aa7.7□□□□□ -1.18
NUP98-216ENST00000529379 MED26O95402 600 aa7.69□□□□□ -1.18
NUP98-216ENST00000529379 TP53P04637 393 aaPredicted RBP7.69□□□□□ -1.18
NUP98-216ENST00000529379 RAB33AQ14088 237 aa7.69□□□□□ -1.18
NUP98-216ENST00000529379 MSMPQ1L6U9 139 aa7.69□□□□□ -1.18
NUP98-216ENST00000529379 GNPTABQ3T906 1256 aa7.69□□□□□ -1.18
NUP98-216ENST00000529379 DTWD2Q8NBA8 298 aa7.69□□□□□ -1.18
NUP98-216ENST00000529379 NETO1Q8TDF5 533 aa7.69□□□□□ -1.18
NUP98-216ENST00000529379 MKRN2Q9H000 416 aaKnown RBP7.69□□□□□ -1.18
NUP98-216ENST00000529379 B2RBV5 119 aa7.68□□□□□ -1.18
NUP98-216ENST00000529379 SLC7A5Q01650 507 aa7.68□□□□□ -1.18
NUP98-216ENST00000529379 NBPF9Q3BBW0 867 aa7.68□□□□□ -1.18
NUP98-216ENST00000529379 AXDND1Q5T1B0 1012 aaPredicted RBP7.68□□□□□ -1.18
NUP98-216ENST00000529379 DCAF15Q66K64 600 aa7.68□□□□□ -1.18
NUP98-216ENST00000529379 VHLLQ6RSH7 139 aa7.68□□□□□ -1.18
NUP98-216ENST00000529379 C6orf15Q6UXA7 325 aaPredicted RBP7.68□□□□□ -1.18
NUP98-216ENST00000529379 PMFBP1Q8TBY8 1022 aa7.68□□□□□ -1.18
NUP98-216ENST00000529379 ST7Q9NRC1 585 aa7.68□□□□□ -1.18
NUP98-216ENST00000529379 ST14Q9Y5Y6 855 aa7.68□□□□□ -1.18
NUP98-216ENST00000529379 SHOXO15266 292 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 COBLO75128 1261 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 GRIK1P39086 918 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 SNW1Q13573 536 aaKnown RBP7.67□□□□□ -1.18
NUP98-216ENST00000529379 FXNQ16595 210 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 IFI16Q16666 785 aaKnown RBP7.67□□□□□ -1.18
NUP98-216ENST00000529379 BBS9Q3SYG4 887 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 CDKAL1Q5VV42 579 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 KIAA1211LQ6NV74 962 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 SMARCC1Q92922 1105 aaPredicted RBP7.67□□□□□ -1.18
NUP98-216ENST00000529379 TRIM55Q9BYV6 548 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 KCNH3Q9ULD8 1083 aa7.67□□□□□ -1.18
NUP98-216ENST00000529379 FAM155AB1AL88 458 aaPredicted RBP7.66□□□□□ -1.18
NUP98-216ENST00000529379 IGSF3O75054 1194 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 GJB6O95452 261 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 SSTR4P31391 388 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 AUHQ13825 339 aaKnown RBP7.66□□□□□ -1.18
NUP98-216ENST00000529379 DDR2Q16832 855 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 NBPF6Q5VWK0 638 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 INTS5Q6P9B9 1019 aaKnown RBP7.66□□□□□ -1.18
NUP98-216ENST00000529379 FAM178BQ8IXR5 827 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 C7orf61Q8IZ16 206 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 PIWIL2Q8TC59 973 aaKnown RBP7.66□□□□□ -1.18
NUP98-216ENST00000529379 NBPF4Q96M43 638 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 HSPA12BQ96MM6 686 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 PRDM14Q9GZV8 571 aa7.66□□□□□ -1.18
NUP98-216ENST00000529379 CBFA2T2O43439 604 aa7.65□□□□□ -1.18
NUP98-216ENST00000529379 DDAH1O94760 285 aa7.65□□□□□ -1.18
NUP98-216ENST00000529379 SRFP11831 508 aa7.65□□□□□ -1.18
NUP98-216ENST00000529379 CD97P48960 835 aa7.65□□□□□ -1.18
NUP98-216ENST00000529379 SERINC3Q13530 473 aa7.65□□□□□ -1.18
NUP98-216ENST00000529379 ANKRD39Q53RE8 183 aa7.65□□□□□ -1.18
NUP98-216ENST00000529379 MRM1Q6IN84 353 aaKnown RBP7.65□□□□□ -1.18
NUP98-216ENST00000529379 GPR62Q9BZJ7 368 aa7.65□□□□□ -1.18
NUP98-216ENST00000529379 DUSP15Q9H1R2 295 aaPredicted RBP7.65□□□□□ -1.18
NUP98-216ENST00000529379 SEMA3GQ9NS98 782 aa7.65□□□□□ -1.18
NUP98-216ENST00000529379 TMEM265A0A087WTH1 108 aa7.64□□□□□ -1.19
NUP98-216ENST00000529379 SHISA3A0PJX4 238 aa7.64□□□□□ -1.19
NUP98-216ENST00000529379 WASH4PA8MWX3 477 aa7.64□□□□□ -1.19
NUP98-216ENST00000529379 H3BS24 57 aa7.64□□□□□ -1.19
NUP98-216ENST00000529379 CLCN7P51798 805 aa7.64□□□□□ -1.19
NUP98-216ENST00000529379 TMC3Q7Z5M5 1100 aa7.64□□□□□ -1.19
NUP98-216ENST00000529379 HAUS7Q99871 368 aa7.64□□□□□ -1.19
NUP98-216ENST00000529379 SUSD2Q9UGT4 822 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms