RNA–Protein interactions for RNA: ENST00000529131.5

C9orf135-206, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-206ENST00000529131 NEDD4P46934 1319 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
C9orf135-206ENST00000529131 BMP2KLQ5H9B9 411 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 ANKRD13CQ8N6S4 541 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 STAG1Q8WVM7 1258 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 CEP95Q96GE4 821 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 RPAP3Q9H6T3 665 aaPredicted RBP11.46□□□□□ -0.57
C9orf135-206ENST00000529131 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 TMOD4Q9NZQ9 345 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 HPS5Q9UPZ3 1129 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 TRIM17Q9Y577 477 aa11.46□□□□□ -0.57
C9orf135-206ENST00000529131 MKI67P46013 3256 aaKnown RBP11.46□□□□□ -0.58
C9orf135-206ENST00000529131 ZNFX1Q9P2E3 1918 aaKnown RBP11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 OSBPP22059 807 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 GCLCP48506 637 aaPredicted RBP11.45□□□□□ -0.58
C9orf135-206ENST00000529131 PTH1RQ03431 593 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 PABPC4Q13310 644 aaKnown RBP eCLIP11.45□□□□□ -0.58
C9orf135-206ENST00000529131 PKN2Q16513 984 aaKnown RBP11.45□□□□□ -0.58
C9orf135-206ENST00000529131 Q3C1V9 767 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 LPAR1Q92633 364 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 FEZ1Q99689 392 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 EFCC1Q9HA90 598 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 ARHGEF10LQ9HCE6 1279 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 BTBD7Q9P203 1132 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 ADAMTS5Q9UNA0 930 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 PTCH2Q9Y6C5 1203 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 TAF6LQ9Y6J9 622 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 SMCHD1A6NHR9 2005 aa11.45□□□□□ -0.58
C9orf135-206ENST00000529131 WDR46O15213 610 aaKnown RBP11.44□□□□□ -0.58
C9orf135-206ENST00000529131 NMT2O60551 498 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 PSMC4P43686 418 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 MFAP1P55081 439 aaKnown RBP11.44□□□□□ -0.58
C9orf135-206ENST00000529131 HAND2P61296 217 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 TFAP4Q01664 338 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 PDE4BQ07343 736 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 ERICH6BQ5W0A0 696 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 RCSD1Q6JBY9 416 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 RASGRP2Q7LDG7 609 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 REPS2Q8NFH8 660 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 ARMC5Q96C12 935 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 CCDC136Q96JN2 1154 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 SRRDQ9UH36 339 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 GJD2Q9UKL4 321 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 SYNPO2Q9UMS6 1093 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 GABRQQ9UN88 632 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 LCTP09848 1927 aa11.44□□□□□ -0.58
C9orf135-206ENST00000529131 KIAA0100Q14667 2235 aaKnown RBP11.43□□□□□ -0.58
C9orf135-206ENST00000529131 MYPNQ86TC9 1320 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 NDUFB10O96000 172 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 GNRH1P01148 92 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 DSG3P32926 999 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 ERVK-9P63128 1117 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 ERVK-24P63145 666 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
C9orf135-206ENST00000529131 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 SPICE1Q8N0Z3 855 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 GMCL1P1Q8NEA9 526 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 SMCR8Q8TEV9 937 aaPredicted RBP11.43□□□□□ -0.58
C9orf135-206ENST00000529131 USP6NLQ92738 828 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 LSG1Q9H089 658 aaKnown RBP11.43□□□□□ -0.58
C9orf135-206ENST00000529131 PORCNQ9H237 461 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 TCP11L1Q9NUJ3 509 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 FBXO28Q9NVF7 368 aa11.43□□□□□ -0.58
C9orf135-206ENST00000529131 PLXNA1Q9UIW2 1896 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 FRMPD3Q5JV73 1810 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 F5H6K3 240 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 TTLL1O95922 423 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 IGHA2P01877 340 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 CYP21A2P08686 494 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 PRKCZQ05513 592 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 KLRC3Q07444 240 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 COL9A3Q14050 684 aaPredicted RBP11.42□□□□□ -0.58
C9orf135-206ENST00000529131 STOX1Q6ZVD7 989 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 ZNF444Q8N0Y2 327 aaPredicted RBP11.42□□□□□ -0.58
C9orf135-206ENST00000529131 GTF3C2Q8WUA4 911 aaPredicted RBP11.42□□□□□ -0.58
C9orf135-206ENST00000529131 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 ATG4CQ96DT6 458 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 NUP88Q99567 741 aaPredicted RBP11.42□□□□□ -0.58
C9orf135-206ENST00000529131 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 ZNF287Q9HBT7 754 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 RABGAP1Q9Y3P9 1069 aa11.42□□□□□ -0.58
C9orf135-206ENST00000529131 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
C9orf135-206ENST00000529131 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
C9orf135-206ENST00000529131 TSPY3P0CV98 308 aa11.41□□□□□ -0.58
C9orf135-206ENST00000529131 TSPY8P0CW00 308 aa11.41□□□□□ -0.58
C9orf135-206ENST00000529131 PCP11498 1178 aaKnown RBP11.41□□□□□ -0.58
C9orf135-206ENST00000529131 PRMT2P55345 433 aa11.41□□□□□ -0.58
C9orf135-206ENST00000529131 IRF5Q13568 498 aa11.41□□□□□ -0.58
C9orf135-206ENST00000529131 COG2Q14746 738 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms