RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TNNI3KQ59H18 835 aa23.21■■□□□ 1.31
SSRP1-204ENST00000529002 OLFML2BQ68BL8 750 aa23.21■■□□□ 1.31
SSRP1-204ENST00000529002 FPGT-TNNI3KV9GXZ4 949 aa23.21■■□□□ 1.31
SSRP1-204ENST00000529002 A0A0G2JMZ2 1700 aa23.21■■□□□ 1.31
SSRP1-204ENST00000529002 COL11A1P12107 1806 aaPredicted RBP23.2■■□□□ 1.3
SSRP1-204ENST00000529002 ERCC3P19447 782 aa23.2■■□□□ 1.3
SSRP1-204ENST00000529002 SHMT1P34896 483 aa23.2■■□□□ 1.3
SSRP1-204ENST00000529002 SEPT2Q15019 361 aa23.2■■□□□ 1.3
SSRP1-204ENST00000529002 CCDC158Q5M9N0 1113 aa23.2■■□□□ 1.3
SSRP1-204ENST00000529002 SYMPKQ92797 1274 aaKnown RBP23.2■■□□□ 1.3
SSRP1-204ENST00000529002 PLXNA1Q9UIW2 1896 aa23.19■■□□□ 1.3
SSRP1-204ENST00000529002 A0A1W2PRG0 241 aa23.19■■□□□ 1.3
SSRP1-204ENST00000529002 PLCD1P51178 756 aa23.19■■□□□ 1.3
SSRP1-204ENST00000529002 KIAA1755Q5JYT7 1200 aa23.19■■□□□ 1.3
SSRP1-204ENST00000529002 SPATC1LQ9H0A9 340 aa23.19■■□□□ 1.3
SSRP1-204ENST00000529002 TLR7Q9NYK1 1049 aaKnown RBP23.19■■□□□ 1.3
SSRP1-204ENST00000529002 PARP14Q460N5 1801 aa23.19■■□□□ 1.3
SSRP1-204ENST00000529002 NAV1Q8NEY1 1877 aa23.18■■□□□ 1.3
SSRP1-204ENST00000529002 IDH1O75874 414 aaKnown RBP23.18■■□□□ 1.3
SSRP1-204ENST00000529002 MUC3AQ02505 3323 aa23.17■■□□□ 1.3
SSRP1-204ENST00000529002 GNAI2P04899 355 aa23.17■■□□□ 1.3
SSRP1-204ENST00000529002 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
SSRP1-204ENST00000529002 PLS1Q14651 629 aa23.17■■□□□ 1.3
SSRP1-204ENST00000529002 TJAP1Q5JTD0 557 aa23.17■■□□□ 1.3
SSRP1-204ENST00000529002 MAGEB6Q8N7X4 407 aa23.17■■□□□ 1.3
SSRP1-204ENST00000529002 TANGO6Q9C0B7 1094 aa23.17■■□□□ 1.3
SSRP1-204ENST00000529002 EHD4Q9H223 541 aa23.17■■□□□ 1.3
SSRP1-204ENST00000529002 CABP5Q9NP86 173 aa23.17■■□□□ 1.3
SSRP1-204ENST00000529002 MYH8P13535 1937 aa23.16■■□□□ 1.3
SSRP1-204ENST00000529002 STRNO43815 780 aa23.16■■□□□ 1.3
SSRP1-204ENST00000529002 PGK1P00558 417 aa23.16■■□□□ 1.3
SSRP1-204ENST00000529002 CLTBP09497 229 aa23.16■■□□□ 1.3
SSRP1-204ENST00000529002 COG2Q14746 738 aa23.16■■□□□ 1.3
SSRP1-204ENST00000529002 PPM1EQ8WY54 764 aa23.16■■□□□ 1.3
SSRP1-204ENST00000529002 TACC3Q9Y6A5 838 aa23.16■■□□□ 1.3
SSRP1-204ENST00000529002 TNFRSF10AO00220 468 aa23.15■■□□□ 1.3
SSRP1-204ENST00000529002 PQBP1O60828 265 aaKnown RBP23.15■■□□□ 1.3
SSRP1-204ENST00000529002 DNAJB2P25686 324 aa23.15■■□□□ 1.3
SSRP1-204ENST00000529002 C1orf53Q5VUE5 145 aa23.15■■□□□ 1.3
SSRP1-204ENST00000529002 SAMD1Q6SPF0 538 aaPredicted RBP23.15■■□□□ 1.3
SSRP1-204ENST00000529002 NCAPG2Q86XI2 1143 aa23.15■■□□□ 1.3
SSRP1-204ENST00000529002 LENG1Q96BZ8 264 aaPredicted RBP23.15■■□□□ 1.3
SSRP1-204ENST00000529002 MAML3Q96JK9 1138 aa23.15■■□□□ 1.3
SSRP1-204ENST00000529002 CCDC8Q9H0W5 538 aaPredicted RBP23.15■■□□□ 1.3
SSRP1-204ENST00000529002 ANTXR1Q9H6X2 564 aa23.15■■□□□ 1.3
SSRP1-204ENST00000529002 GPR108Q9NPR9 543 aa23.15■■□□□ 1.3
SSRP1-204ENST00000529002 DBNLQ9UJU6 430 aaKnown RBP23.15■■□□□ 1.3
SSRP1-204ENST00000529002 PHF24Q9UPV7 400 aa23.15■■□□□ 1.3
SSRP1-204ENST00000529002 RAG1P15918 1043 aa23.14■■□□□ 1.29
SSRP1-204ENST00000529002 TAL1P17542 331 aaPredicted RBP23.14■■□□□ 1.29
SSRP1-204ENST00000529002 OS9Q13438 667 aaPredicted RBP23.14■■□□□ 1.29
SSRP1-204ENST00000529002 TTC6Q86TZ1 520 aa23.14■■□□□ 1.29
SSRP1-204ENST00000529002 CLEC10AQ8IUN9 316 aa23.14■■□□□ 1.29
SSRP1-204ENST00000529002 SHCBP1Q8NEM2 672 aa23.14■■□□□ 1.29
SSRP1-204ENST00000529002 TMEM265A0A087WTH1 108 aa23.13■■□□□ 1.29
SSRP1-204ENST00000529002 MPHOSPH10O00566 681 aaKnown RBP23.13■■□□□ 1.29
SSRP1-204ENST00000529002 KIAA0355O15063 1070 aa23.13■■□□□ 1.29
SSRP1-204ENST00000529002 CT47B1P0C2W7 299 aaPredicted RBP23.13■■□□□ 1.29
SSRP1-204ENST00000529002 ARHGAP45Q92619 1136 aa23.13■■□□□ 1.29
SSRP1-204ENST00000529002 CLUAP1Q96AJ1 413 aa23.13■■□□□ 1.29
SSRP1-204ENST00000529002 ATG4CQ96DT6 458 aa23.13■■□□□ 1.29
SSRP1-204ENST00000529002 ZNF576Q9H609 170 aa23.13■■□□□ 1.29
SSRP1-204ENST00000529002 XPNPEP3Q9NQH7 507 aa23.13■■□□□ 1.29
SSRP1-204ENST00000529002 HOXC10Q9NYD6 342 aa23.13■■□□□ 1.29
SSRP1-204ENST00000529002 TCF20Q9UGU0 1960 aaKnown RBP23.12■■□□□ 1.29
SSRP1-204ENST00000529002 NCOR1O75376 2440 aa23.12■■□□□ 1.29
SSRP1-204ENST00000529002 TRIM27P14373 513 aa23.12■■□□□ 1.29
SSRP1-204ENST00000529002 FPGSQ05932 587 aa23.12■■□□□ 1.29
SSRP1-204ENST00000529002 POLA2Q14181 598 aa23.12■■□□□ 1.29
SSRP1-204ENST00000529002 ZNF512BQ96KM6 892 aaPredicted RBP23.12■■□□□ 1.29
SSRP1-204ENST00000529002 A0A1W2PQ45 241 aaPredicted RBP23.11■■□□□ 1.29
SSRP1-204ENST00000529002 A0A1W2PQY0 241 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 GRXCR1A8MXD5 290 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 BCAR3O75815 825 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 PGK2P07205 417 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 DSG3P32926 999 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 GABPAQ06546 454 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 SPICE1Q8N0Z3 855 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 TMEM39AQ9NV64 488 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 GBF1Q92538 1859 aa23.11■■□□□ 1.29
SSRP1-204ENST00000529002 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.1■■□□□ 1.29
SSRP1-204ENST00000529002 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.1■■□□□ 1.29
SSRP1-204ENST00000529002 SURF6O75683 361 aaKnown RBP23.1■■□□□ 1.29
SSRP1-204ENST00000529002 POLR3DP05423 398 aaPredicted RBP23.1■■□□□ 1.29
SSRP1-204ENST00000529002 RARBP10826 455 aa23.1■■□□□ 1.29
SSRP1-204ENST00000529002 PBX2P40425 430 aa23.1■■□□□ 1.29
SSRP1-204ENST00000529002 SLC44A5Q8NCS7 719 aa23.1■■□□□ 1.29
SSRP1-204ENST00000529002 RIOK1Q9BRS2 568 aaKnown RBP23.1■■□□□ 1.29
SSRP1-204ENST00000529002 FLOT1O75955 427 aa23.09■■□□□ 1.29
SSRP1-204ENST00000529002 CYP2D6P10635 497 aa23.09■■□□□ 1.29
SSRP1-204ENST00000529002 FAAP100Q0VG06 881 aa23.09■■□□□ 1.29
SSRP1-204ENST00000529002 TIFAQ96CG3 184 aa23.09■■□□□ 1.29
SSRP1-204ENST00000529002 EAF2Q96CJ1 260 aaPredicted RBP23.09■■□□□ 1.29
SSRP1-204ENST00000529002 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.09■■□□□ 1.299e-8■■■■■ 37.1
SSRP1-204ENST00000529002 MROH8Q9H579 483 aa23.09■■□□□ 1.29
SSRP1-204ENST00000529002 C1orf115Q9H7X2 142 aa23.09■■□□□ 1.29
SSRP1-204ENST00000529002 SLC5A4Q9NY91 659 aa23.09■■□□□ 1.29
SSRP1-204ENST00000529002 BAZ2AQ9UIF9 1905 aaKnown RBP23.09■■□□□ 1.29
SSRP1-204ENST00000529002 SIAH1Q8IUQ4 282 aa23.08■■□□□ 1.29
SSRP1-204ENST00000529002 PRDM12Q9H4Q4 367 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms