RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CMTR1Q8N1G2 835 aaKnown RBP28.88■■■□□ 2.21
LDLRAD3-203ENST00000528989 RAD21O60216 631 aa28.87■■■□□ 2.21
LDLRAD3-203ENST00000528989 HSP90AA1P07900 732 aaKnown RBP28.87■■■□□ 2.21
LDLRAD3-203ENST00000528989 PTPRAP18433 802 aa28.87■■■□□ 2.21
LDLRAD3-203ENST00000528989 YY1P25490 414 aa28.87■■■□□ 2.21
LDLRAD3-203ENST00000528989 IREB2P48200 963 aaKnown RBP28.87■■■□□ 2.21
LDLRAD3-203ENST00000528989 CLMNQ96JQ2 1002 aa28.87■■■□□ 2.21
LDLRAD3-203ENST00000528989 UBE2Q2LH0YL09 131 aa28.87■■■□□ 2.21
LDLRAD3-203ENST00000528989 PICK1Q9NRD5 415 aa28.87■■■□□ 2.21
LDLRAD3-203ENST00000528989 DDAH1O94760 285 aa28.86■■■□□ 2.21
LDLRAD3-203ENST00000528989 CELF2O95319 508 aaKnown RBP28.86■■■□□ 2.21
LDLRAD3-203ENST00000528989 CTDNEP1O95476 244 aa28.86■■■□□ 2.21
LDLRAD3-203ENST00000528989 USP17L2Q6R6M4 530 aa28.86■■■□□ 2.21
LDLRAD3-203ENST00000528989 SNCAIPQ9Y6H5 919 aa28.86■■■□□ 2.21
LDLRAD3-203ENST00000528989 USP17L5A8MUK1 530 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 ZYXQ15942 572 aaKnown RBP28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 CST9Q5W186 159 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 STAG2Q8N3U4 1231 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 CNKSR2Q8WXI2 1034 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 ZHX2Q9Y6X8 837 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 GOLGA8HP0CJ92 632 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 MAP3K11Q16584 847 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 RTN1Q16799 776 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 KIAA1755Q5JYT7 1200 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 CCDC82Q8N4S0 544 aa28.85■■■□□ 2.21
LDLRAD3-203ENST00000528989 PDHBP11177 359 aa28.84■■■□□ 2.21
LDLRAD3-203ENST00000528989 PPP4R3BQ5MIZ7 849 aa28.84■■■□□ 2.21
LDLRAD3-203ENST00000528989 NOL9Q5SY16 702 aaKnown RBP28.84■■■□□ 2.21
LDLRAD3-203ENST00000528989 ARHGEF10LQ9HCE6 1279 aa28.84■■■□□ 2.21
LDLRAD3-203ENST00000528989 F5H6K3 240 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 JAK2O60674 1132 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 KLRC3Q07444 240 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 DGKZQ13574 1117 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 ARMC9Q7Z3E5 817 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 SPICE1Q8N0Z3 855 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 GINM1Q9NU53 330 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 MAD2L2Q9UI95 211 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 TMX2Q9Y320 296 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 CSADQ9Y600 493 aa28.83■■■□□ 2.21
LDLRAD3-203ENST00000528989 CALM1P0DP23 149 aa28.83■■■□□ 2.2
LDLRAD3-203ENST00000528989 CALM2P0DP24 149 aa28.83■■■□□ 2.2
LDLRAD3-203ENST00000528989 CALM3P0DP25 149 aa28.83■■■□□ 2.2
LDLRAD3-203ENST00000528989 RCAN1P53805 252 aa28.83■■■□□ 2.2
LDLRAD3-203ENST00000528989 ANKRD13AQ8IZ07 590 aa28.83■■■□□ 2.2
LDLRAD3-203ENST00000528989 ZNF784Q8NCA9 323 aaPredicted RBP28.83■■■□□ 2.2
LDLRAD3-203ENST00000528989 ELP3Q9H9T3 547 aa28.83■■■□□ 2.2
LDLRAD3-203ENST00000528989 PLEKHA8P1O95397 391 aa28.82■■■□□ 2.2
LDLRAD3-203ENST00000528989 SPP2Q13103 211 aa28.82■■■□□ 2.2
LDLRAD3-203ENST00000528989 NTRK3Q16288 839 aa28.82■■■□□ 2.2
LDLRAD3-203ENST00000528989 ATAD5Q96QE3 1844 aa28.82■■■□□ 2.2
LDLRAD3-203ENST00000528989 FRMPD2Q68DX3 1309 aaPredicted RBP28.82■■■□□ 2.2
LDLRAD3-203ENST00000528989 NBPF11Q86T75 865 aa28.81■■■□□ 2.2
LDLRAD3-203ENST00000528989 NSUN7Q8NE18 718 aaKnown RBP28.81■■■□□ 2.2
LDLRAD3-203ENST00000528989 CTCFLQ8NI51 663 aaPredicted RBP28.81■■■□□ 2.2
LDLRAD3-203ENST00000528989 CPVLQ9H3G5 476 aa28.81■■■□□ 2.2
LDLRAD3-203ENST00000528989 GBA2Q9HCG7 927 aaPredicted RBP28.81■■■□□ 2.2
LDLRAD3-203ENST00000528989 TRIM75PA6NK02 468 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 CPLX1O14810 134 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 NDUFB10O96000 172 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 GRM4Q14833 912 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 LDLRAD1Q5T700 205 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 SLFN13Q68D06 897 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 PHKBQ93100 1093 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 INTS4Q96HW7 963 aaKnown RBP28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 NUP88Q99567 741 aaPredicted RBP28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 NID2Q14112 1375 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 MYH4Q9Y623 1939 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 SNHG28P0DPA3 235 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 DDX11Q96FC9 970 aa28.8■■■□□ 2.2
LDLRAD3-203ENST00000528989 PALM3A6NDB9 673 aaPredicted RBP28.79■■■□□ 2.2
LDLRAD3-203ENST00000528989 MTMR2Q13614 643 aa28.79■■■□□ 2.2
LDLRAD3-203ENST00000528989 KCTD1Q719H9 257 aa28.79■■■□□ 2.2
LDLRAD3-203ENST00000528989 SRBD1Q8N5C6 995 aaKnown RBP28.79■■■□□ 2.2
LDLRAD3-203ENST00000528989 ZNF280CQ8ND82 737 aa28.79■■■□□ 2.2
LDLRAD3-203ENST00000528989 GMCL1P1Q8NEA9 526 aa28.79■■■□□ 2.2
LDLRAD3-203ENST00000528989 FEZ1Q99689 392 aa28.79■■■□□ 2.2
LDLRAD3-203ENST00000528989 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.79■■■□□ 2.2
LDLRAD3-203ENST00000528989 DHX16O60231 1041 aaKnown RBP28.78■■■□□ 2.2
LDLRAD3-203ENST00000528989 PARP1P09874 1014 aaKnown RBP28.78■■■□□ 2.2
LDLRAD3-203ENST00000528989 DOCK1Q14185 1865 aa28.78■■■□□ 2.2
LDLRAD3-203ENST00000528989 MAP3K14Q99558 947 aa28.78■■■□□ 2.2
LDLRAD3-203ENST00000528989 WDR18Q9BV38 432 aa28.78■■■□□ 2.2
LDLRAD3-203ENST00000528989 AFG3L2Q9Y4W6 797 aa28.78■■■□□ 2.2
LDLRAD3-203ENST00000528989 GPCPD1Q9NPB8 672 aa28.78■■■□□ 2.2
LDLRAD3-203ENST00000528989 CCDC196A0A1B0GTZ2 297 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 PTPDC1A2A3K4 754 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 USP17L10C9JJH3 530 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 KIF5BP33176 963 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 SLC1A4P43007 532 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 SLC35G1Q2M3R5 365 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 TTBK2Q6IQ55 1244 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 TMTC3Q6ZXV5 915 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 C2orf69Q8N8R5 385 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 VCPKMTQ9H867 229 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 OTOFQ9HC10 1997 aa28.77■■■□□ 2.2
LDLRAD3-203ENST00000528989 PAPPA2Q9BXP8 1791 aa28.76■■■□□ 2.2
LDLRAD3-203ENST00000528989 GJB2P29033 226 aa28.76■■■□□ 2.2
LDLRAD3-203ENST00000528989 ZNF543Q08ER8 600 aa28.76■■■□□ 2.2
LDLRAD3-203ENST00000528989 FUT2Q10981 343 aa28.76■■■□□ 2.2
LDLRAD3-203ENST00000528989 OTUD5Q96G74 571 aa28.76■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms