RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 GNAI2P04899 355 aa10.48□□□□□ -0.73
SSBP3-212ENST00000528930 PUM3Q15397 648 aaKnown RBP10.48□□□□□ -0.73
SSBP3-212ENST00000528930 ZNF787Q6DD87 383 aa10.48□□□□□ -0.73
SSBP3-212ENST00000528930 DZIP1LQ8IYY4 767 aaKnown RBP10.48□□□□□ -0.73
SSBP3-212ENST00000528930 SIL1Q9H173 461 aa10.48□□□□□ -0.73
SSBP3-212ENST00000528930 PDLIM7Q9NR12 457 aa10.48□□□□□ -0.73
SSBP3-212ENST00000528930 JAG2Q9Y219 1238 aa10.48□□□□□ -0.73
SSBP3-212ENST00000528930 DOCK2Q92608 1830 aa10.48□□□□□ -0.73
SSBP3-212ENST00000528930 KMT2EQ8IZD2 1858 aa10.47□□□□□ -0.73
SSBP3-212ENST00000528930 F8W031 263 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-212ENST00000528930 SRGAP3O43295 1099 aa10.47□□□□□ -0.73
SSBP3-212ENST00000528930 IFIT1P09914 478 aaKnown RBP10.47□□□□□ -0.73
SSBP3-212ENST00000528930 IGFBP4P22692 258 aa10.47□□□□□ -0.73
SSBP3-212ENST00000528930 IL15P40933 162 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-212ENST00000528930 SNX17Q15036 470 aa10.47□□□□□ -0.73
SSBP3-212ENST00000528930 FAM110CQ1W6H9 321 aa10.47□□□□□ -0.73
SSBP3-212ENST00000528930 SWT1Q5T5J6 900 aaKnown RBP10.47□□□□□ -0.73
SSBP3-212ENST00000528930 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-212ENST00000528930 TDRD3Q9H7E2 651 aaKnown RBP10.47□□□□□ -0.73
SSBP3-212ENST00000528930 PNMA6EA0A0J9YXQ4 647 aa10.46□□□□□ -0.73
SSBP3-212ENST00000528930 TCP10L2B9ZVM9 353 aa10.46□□□□□ -0.73
SSBP3-212ENST00000528930 TNNI2P48788 182 aa10.46□□□□□ -0.73
SSBP3-212ENST00000528930 CAVIN4Q5BKX8 364 aa10.46□□□□□ -0.73
SSBP3-212ENST00000528930 FTSJ3Q8IY81 847 aaKnown RBP10.46□□□□□ -0.73
SSBP3-212ENST00000528930 LPIN2Q92539 896 aa10.46□□□□□ -0.73
SSBP3-212ENST00000528930 PBX4Q9BYU1 374 aa10.46□□□□□ -0.73
SSBP3-212ENST00000528930 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.73
SSBP3-212ENST00000528930 IQSEC3Q9UPP2 1182 aaPredicted RBP10.46□□□□□ -0.73
SSBP3-212ENST00000528930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.46□□□□□ -0.73
SSBP3-212ENST00000528930 PTPRZ1P23471 2315 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-212ENST00000528930 TRIM43BA6NCK2 446 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 CXCL11O14625 94 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 SLC5A1P13866 664 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 CCND3P30281 292 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-212ENST00000528930 INPP5BP32019 993 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 ATP8B2P98198 1209 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 CACNB2Q08289 660 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-212ENST00000528930 GRIK5Q16478 980 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 MFSD14BQ5SR56 506 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 SH3RF1Q7Z6J0 888 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 VPS37DQ86XT2 251 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 ITPRIPQ8IWB1 547 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 PANK1Q8TE04 598 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 HERVK_113Q902F9 699 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-212ENST00000528930 UIMC1Q96RL1 719 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 PRDM5Q9NQX1 630 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-212ENST00000528930 ATP11BQ9Y2G3 1177 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 DAGLAQ9Y4D2 1042 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 TRANK1O15050 2925 aa10.45□□□□□ -0.74
SSBP3-212ENST00000528930 ZFHX4Q86UP3 3567 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 FAM186AA6NE01 2351 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 A0A0G2JLL6 359 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-212ENST00000528930 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
SSBP3-212ENST00000528930 RBM5P52756 815 aaKnown RBP eCLIP10.44□□□□□ -0.74
SSBP3-212ENST00000528930 ATP2B3Q16720 1220 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 NOL9Q5SY16 702 aaKnown RBP10.44□□□□□ -0.74
SSBP3-212ENST00000528930 PADI6Q6TGC4 694 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 PRRT2Q7Z6L0 340 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-212ENST00000528930 ANKRD13CQ8N6S4 541 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 SSH3Q8TE77 659 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 SMCR8Q8TEV9 937 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-212ENST00000528930 HOOK2Q96ED9 719 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 ZNF112Q9UJU3 913 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 RCAN3Q9UKA8 241 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 COG5Q9UP83 839 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 CHD8Q9HCK8 2581 aa10.44□□□□□ -0.74
SSBP3-212ENST00000528930 CACNA1HO95180 2353 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 DNM1LO00429 736 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 ADORA1P30542 326 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 TIMM10P62072 90 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 TFCP2Q12800 502 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 CHAF1AQ13111 956 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-212ENST00000528930 CSPP1Q1MSJ5 1256 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 DCAF15Q66K64 600 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 FASTKD5Q7L8L6 764 aaKnown RBP10.43□□□□□ -0.74
SSBP3-212ENST00000528930 TBC1D22AQ8WUA7 517 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 ZNF341Q9BYN7 854 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 SERPINA10Q9UK55 444 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 TTF2Q9UNY4 1162 aaKnown RBP10.43□□□□□ -0.74
SSBP3-212ENST00000528930 ATRXP46100 2492 aa10.43□□□□□ -0.74
SSBP3-212ENST00000528930 TPRP12270 2363 aaKnown RBP10.43□□□□□ -0.74
SSBP3-212ENST00000528930 FRAT2O75474 233 aaPredicted RBP10.42□□□□□ -0.74
SSBP3-212ENST00000528930 MS4A1P11836 297 aa10.42□□□□□ -0.74
SSBP3-212ENST00000528930 PHKA1P46020 1223 aa10.42□□□□□ -0.74
SSBP3-212ENST00000528930 TRIM60Q495X7 471 aa10.42□□□□□ -0.74
SSBP3-212ENST00000528930 RASIP1Q5U651 963 aa10.42□□□□□ -0.74
SSBP3-212ENST00000528930 SLC39A5Q6ZMH5 540 aa10.42□□□□□ -0.74
SSBP3-212ENST00000528930 COL4A4P53420 1690 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 MYH13Q9UKX3 1938 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 A0A1B0GUL7 405 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 ALADP13716 330 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 POU3F3P20264 500 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 HDLBPQ00341 1268 aaKnown RBP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 G3BP1Q13283 466 aaKnown RBP eCLIP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 MVPQ14764 893 aaKnown RBP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 C1orf53Q5VUE5 145 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 CCDC102BQ68D86 513 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms