RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 CCDC152Q4G0S7 254 aa5.16□□□□□ -1.58
CHD7-205ENST00000527825 INTS6LQ5JSJ4 861 aaKnown RBP5.16□□□□□ -1.58
CHD7-205ENST00000527825 COPS6Q7L5N1 327 aa5.16□□□□□ -1.58
CHD7-205ENST00000527825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.16□□□□□ -1.58
CHD7-205ENST00000527825 HOOK2Q96ED9 719 aa5.16□□□□□ -1.58
CHD7-205ENST00000527825 ZBED3Q96IU2 234 aaPredicted RBP5.16□□□□□ -1.58
CHD7-205ENST00000527825 CCDC136Q96JN2 1154 aa5.16□□□□□ -1.58
CHD7-205ENST00000527825 COG6Q9Y2V7 657 aa5.16□□□□□ -1.58
CHD7-205ENST00000527825 LRRC37A2A6NM11 1700 aa5.16□□□□□ -1.58
CHD7-205ENST00000527825 TTC28Q96AY4 2481 aa5.16□□□□□ -1.58
CHD7-205ENST00000527825 PTPRFP10586 1907 aa5.15□□□□□ -1.58
CHD7-205ENST00000527825 HTATSF1O43719 755 aaKnown RBP5.15□□□□□ -1.59
CHD7-205ENST00000527825 IGFBP4P22692 258 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 KCNJ4P48050 445 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 MCCD1P59942 119 aaPredicted RBP5.15□□□□□ -1.59
CHD7-205ENST00000527825 EIF4A1P60842 406 aaKnown RBP5.15□□□□□ -1.59
CHD7-205ENST00000527825 DHX9Q08211 1270 aaKnown RBP5.15□□□□□ -1.59
CHD7-205ENST00000527825 GRIN2CQ14957 1233 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 LRRC26Q2I0M4 334 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.15□□□□□ -1.59
CHD7-205ENST00000527825 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.15□□□□□ -1.59
CHD7-205ENST00000527825 SMCR8Q8TEV9 937 aaPredicted RBP5.15□□□□□ -1.59
CHD7-205ENST00000527825 ZNF592Q92610 1267 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 ZKSCAN4Q969J2 545 aaPredicted RBP5.15□□□□□ -1.59
CHD7-205ENST00000527825 PHACTR3Q96KR7 559 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 NECAB3Q96P71 396 aaPredicted RBP5.15□□□□□ -1.59
CHD7-205ENST00000527825 UIMC1Q96RL1 719 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 WRNIP1Q96S55 665 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 EPHX3Q9H6B9 360 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 SEC31BQ9NQW1 1179 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 OGDHLQ9ULD0 1010 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 PFASO15067 1338 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 MYO9BQ13459 2157 aa5.15□□□□□ -1.59
CHD7-205ENST00000527825 LAMA2P24043 3122 aaKnown RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 FAM86C2PA6NEL3 165 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 FIGNL2A6NMB9 653 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 ESPNB1AK53 854 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 TCP10L2B9ZVM9 353 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 SMIM22K7EJ46 135 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 SPINT1O43278 529 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 RAD21O60216 631 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 ANXA1P04083 346 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 U2AF1L5P0DN76 240 aaPredicted RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 CCT4P50991 539 aaKnown RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 RAB15P59190 212 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 U2AF1Q01081 240 aaKnown RBP eCLIP5.14□□□□□ -1.59
CHD7-205ENST00000527825 PTSQ03393 145 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 PPATQ06203 517 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 VAC14Q08AM6 782 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 C9orf50Q5SZB4 431 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 AKNAD1Q5T1N1 836 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 XAGE3Q8WTP9 111 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 POM121Q96HA1 1249 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 PRMT6Q96LA8 375 aaPredicted RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 RNPC3Q96LT9 517 aaKnown RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 AGBL1Q96MI9 1066 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 CCDC85AQ96PX6 553 aaPredicted RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 CDC5LQ99459 802 aaKnown RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 PRKRIP1Q9H875 184 aaPredicted RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 PRDM5Q9NQX1 630 aaPredicted RBP5.14□□□□□ -1.59
CHD7-205ENST00000527825 SNCAIPQ9Y6H5 919 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 RLFQ13129 1914 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 CACNA1AO00555 2505 aa5.14□□□□□ -1.59
CHD7-205ENST00000527825 PLXNB2O15031 1838 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 ATP5J2-PTCD1G3V325 749 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 ERVH48-1M5A8F1 160 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 CYP2C8P10632 490 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 BCRP11274 1271 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 IRX6P78412 446 aaPredicted RBP5.13□□□□□ -1.59
CHD7-205ENST00000527825 RELBQ01201 579 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 DCAF15Q66K64 600 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 B4GALNT3Q6L9W6 998 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 GADL1Q6ZQY3 521 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 CCDC129Q6ZRS4 1044 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 MICALL1Q8N3F8 863 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 CFAP53Q96M91 514 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 SENP6Q9GZR1 1112 aaPredicted RBP5.13□□□□□ -1.59
CHD7-205ENST00000527825 TMEM39BQ9GZU3 492 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 ZNF576Q9H609 170 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 TDRD3Q9H7E2 651 aaKnown RBP5.13□□□□□ -1.59
CHD7-205ENST00000527825 TMOD2Q9NZR1 351 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 ZNF70Q9UC06 446 aaPredicted RBP5.13□□□□□ -1.59
CHD7-205ENST00000527825 NUDCQ9Y266 331 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 ATP11BQ9Y2G3 1177 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 LEMD3Q9Y2U8 911 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 PCDHAC2Q9Y5I4 1007 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 A0A1B0GUL6 1792 aa5.13□□□□□ -1.59
CHD7-205ENST00000527825 NCOR1O75376 2440 aa5.12□□□□□ -1.59
CHD7-205ENST00000527825 MUC6Q6W4X9 2439 aa5.12□□□□□ -1.59
CHD7-205ENST00000527825 DOCK2Q92608 1830 aa5.12□□□□□ -1.59
CHD7-205ENST00000527825 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.12□□□□□ -1.59
CHD7-205ENST00000527825 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.12□□□□□ -1.59
CHD7-205ENST00000527825 PDE8AO60658 829 aa5.12□□□□□ -1.59
CHD7-205ENST00000527825 CTSOP43234 321 aaPredicted RBP5.12□□□□□ -1.59
CHD7-205ENST00000527825 NHLH1Q02575 133 aa5.12□□□□□ -1.59
CHD7-205ENST00000527825 CNGB1Q14028 1251 aaPredicted RBP5.12□□□□□ -1.59
CHD7-205ENST00000527825 PROSER3Q2NL68 480 aa5.12□□□□□ -1.59
CHD7-205ENST00000527825 RNF20Q5VTR2 975 aa5.12□□□□□ -1.59
CHD7-205ENST00000527825 FASTKD5Q7L8L6 764 aaKnown RBP5.12□□□□□ -1.59
CHD7-205ENST00000527825 PLBD2Q8NHP8 589 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms